Gene EcSMS35_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3674 
SymbolnudE 
ID6142731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand- 
Start bp3732380 
End bp3732940 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content51% 
IMG OID641618501 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_001745641 
Protein GI170680526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.251567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.322169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CATTACAAAA ACCCACCATT CTGAATGTTG AAACTGTAGC CCGTTCACGA 
CTGTTTACCG TCGAAAGCGT GGATCTGGAG TTCAGCAATG GCGTGCGGCG TGTTTATGAA 
CGAATGCGTC CAACCAACCG GGAAGCGGTG ATGATTGTGC CGATTGTGGA CGATCACCTG 
ATCCTGATCC GCGAATACGC AGTGGGAACG GAATCCTACG AATTAGGTTT TTCGAAAGGA 
TTAATTGATC CGGGTGAAAG CGTCTACGAA GCCGCTAACC GCGAGCTAAA AGAAGAAGTG 
GGATTTGGTG CGAACGATCT GACTTTTTTG AAGAAGCTCA GCATGGCGCC GTCTTACTTT 
TCCAGCAAAA TGAATATCGT GGTAGCGCAA GATCTCTATC CGGAATCGCT GGAAGGCGAT 
GAGCCAGAGC CGCTACCACA GGTGCGCTGG CCGCTGGCGC ATATGATGGA TTTGCTGGAA 
GATCCTGACT TCAATGAAGC GCGTAATGTC AGCGCGCTGT TCCTCGTGCG CGAATGGTTG 
AAGGGGCAGG GGCGGTTGTA A
 
Protein sequence
MSKSLQKPTI LNVETVARSR LFTVESVDLE FSNGVRRVYE RMRPTNREAV MIVPIVDDHL 
ILIREYAVGT ESYELGFSKG LIDPGESVYE AANRELKEEV GFGANDLTFL KKLSMAPSYF 
SSKMNIVVAQ DLYPESLEGD EPEPLPQVRW PLAHMMDLLE DPDFNEARNV SALFLVREWL 
KGQGRL