| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3649 |
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| Symbol | nirC |
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| ID | 6143398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3709131 |
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| End bp | 3709937 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618476 |
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| Product | nitrite transporter NirC |
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| Protein accession | YP_001745616 |
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| Protein GI | 170683994 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000222466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTACAG ACACTATTAA TAAGTGTGCG GCTAACGCTG CGCGCATTGC ACGCCTGTCG
GCAAATAACC CGCTCGGCTT CTGGGTCAGC TCCGCAATGG CGGGGGCGTA TGTGGGTCTT
GGGATCATCC TGATTTTCAC GCTCGGTAAT TTGCTCGACC CGTCCGTACG TCCTCTGGTG
ATGGGCGCGA CCTTTGGTAT CGCCTTAACG CTGGTCATTA TTGCTGGTTC TGAACTGTTC
ACCGGACACA CCATGTTCCT CACCTTTGGA GTGAAAGCGG GCACTATCAG CCACGGGCAA
ATGTGGGCAA TCCTGCCGCA AACCTGGCTG GGTAACCTGG TTGGTTCCGT CTTTGTTGCC
ATGCTCTATA GCTGGGGCGG CGGTAGCCTG CTGCCGGTAG ATACCAGCAT CGTTCACTCC
GTCGCGCTGG CTAAAACCAC TGCACCGGCA ATGGTACTGT TCTTCAAAGG TGCATTGTGT
AACTGGCTGG TTTGCCTGGC TATCTGGATG GCGCTGCGCA CTGAAGGGGC GGCGAAATTT
ATCGCTATCT GGTGGTGTCT GCTGGCATTT ATCGCGTCCG GCTACGAGCA CTCCATCGCG
AACATGACGC TGTTCGCCCT CTCCTGGTTT GGCAACCACA GCGAAGCCTA CACGCTGGCG
GGTATTGGTC ATAACCTGCT GTGGGTGACG CTGGGTAATA CTTTATCAGG TGCCGTATTC
ATGGGATTGG GTTATTGGTA TGCTACGCCG AAAGCGAATC GTCCGGTTGC GGACAAATTT
AATCAAACTG AAACAGCTGC CGGTTAA
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| Protein sequence | MFTDTINKCA ANAARIARLS ANNPLGFWVS SAMAGAYVGL GIILIFTLGN LLDPSVRPLV
MGATFGIALT LVIIAGSELF TGHTMFLTFG VKAGTISHGQ MWAILPQTWL GNLVGSVFVA
MLYSWGGGSL LPVDTSIVHS VALAKTTAPA MVLFFKGALC NWLVCLAIWM ALRTEGAAKF
IAIWWCLLAF IASGYEHSIA NMTLFALSWF GNHSEAYTLA GIGHNLLWVT LGNTLSGAVF
MGLGYWYATP KANRPVADKF NQTETAAG
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