| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3646 |
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| Symbol | tsgA |
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| ID | 6146691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3704697 |
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| End bp | 3705878 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618473 |
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| Product | hypothetical protein |
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| Protein accession | YP_001745613 |
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| Protein GI | 170682755 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.865659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000149858 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAACA GCAATCGCAT CAAGCTCACA TGGATTAGCT TTCTCTCCTA CGCACTGACC
GGTGCGTTGG TTATTGTCAC CGGGATGGTG ATGGGAAATA TCGCCGATTA TTTCAATCTG
CCTGTTTCCA GTATGAGTAA TACCTTCACC TTCCTCAACG CCGGCATTTT AATCTCTATC
TTCCTCAACG CCTGGCTGAT GGAAATCGTC CCGTTGAAAA CGCAGTTACG TTTTGGCTTT
CTCCTGATGG TGCTGGCGGT TGCCGGTTTG ATGTTCAGCC ACAGCCTGGC ACTGTTCTCG
GCGGCGATGT TCATTCTCGG GGTGGTCAGC GGCATCACCA TGTCGATTGG TACATTCCTG
GTAACACAAA TGTATGAAGG ACGTCAGCGC GGTTCACGCC TGTTATTTAC CGACTCCTTC
TTCAGTATGG CCGGGATGAT TTTCCCAATG ATCGCCGCGT TTCTGCTGGC GCGCAGCATT
GAGTGGTACT GGGTTTATGC CTGCATCGGG CTGGTGTACG TCGCTATCTT TATTCTGACC
TTCGGCTGTG AGTTCCCGGC GCTGGGTAAA CATGCGCCAA AAACGGACGC TCCGGTAGCG
AAAGAAAAAT GGGGGATCGG CGTGCTGTTT CTCTCCATTG CGGCACTGTG CTACATCCTC
GGTCAGTTAG GTTTTATCTC CTGGGTGCCT GAGTATGCCA AAGGCCTGGG CATGAGCCTG
AACGACGCGG GCACGCTGGT GAGTAACTTC TGGATGTCAT ACATGGTCGG CATGTGGGCG
TTCAGCTTTA TTCTTCGCTT CTTTGATTTG CAACGCATTC TGACCGTACT GGCTGGTCTG
GCTGCGATTC TGATGTACGT CTTTAACACC GGAACACCGG CACATATGGC GTGGTCAATT
CTCGCCCTGG GCTTCTTCTC CAGCGCGATC TATACCACCA TCATCACTTT GGGTTCACAG
CAGACCAAAG TACCGTCGCC AAAACTGGTT AACTTTGTCC TGACCTGCGG GACCATCGGT
ACTATGTTGA CCTTTGTGGT TACCGGCCCG ATTGTTGAAC ATAGCGGTCC GCAGGCGGCG
CTGCTGACGG CAAACGGTCT GTACGCTGTC GTCTTTGTGA TGTGCTTCCT GTTAGGTTTC
GTCAGCCGTC ACCGTCAGCA TAACACCCTG ACCTCTCATT AA
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| Protein sequence | MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFNL PVSSMSNTFT FLNAGILISI
FLNAWLMEIV PLKTQLRFGF LLMVLAVAGL MFSHSLALFS AAMFILGVVS GITMSIGTFL
VTQMYEGRQR GSRLLFTDSF FSMAGMIFPM IAAFLLARSI EWYWVYACIG LVYVAIFILT
FGCEFPALGK HAPKTDAPVA KEKWGIGVLF LSIAALCYIL GQLGFISWVP EYAKGLGMSL
NDAGTLVSNF WMSYMVGMWA FSFILRFFDL QRILTVLAGL AAILMYVFNT GTPAHMAWSI
LALGFFSSAI YTTIITLGSQ QTKVPSPKLV NFVLTCGTIG TMLTFVVTGP IVEHSGPQAA
LLTANGLYAV VFVMCFLLGF VSRHRQHNTL TSH
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