Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3644 |
Symbol | ppiA |
ID | 6146194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3703854 |
End bp | 3704426 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641618471 |
Product | peptidyl-prolyl cis-trans isomerase A (rotamase A) |
Protein accession | YP_001745611 |
Protein GI | 170681864 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.899987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000271496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAAAT CGACCCTGGC GGCGATGGCT GCTGTTTTCG CTCTTTCTGC TCTTTCTCCC GCAGCAATGG CAGCGAAAGG GGACCCGCAC GTATTGTTGA CAACCTCAGC TGGTAACATC GAACTGGAGC TGGATAAACA AAAAGCGCCA GTGTCTGTGC AAAACTTTGT CGATTATGTG AACAGTGGTT TTTATAACAA CACGACCTTT CACCGCGTCA TTCCTGGCTT TATGATTCAG GGCGGCGGTT TCACCGAGCA GATGCAGCAG AAAAAACCAA ACCCGCCAAT CAAAAATGAA GCAGATAACG GCCTGCGCAA CACGCGTGGC ACCATCGCGA TGGCGCGTAC CGCTGACAAA GACAGCGCCA CCAGCCAGTT CTTTATCAAC GTTGCCGATA ACGCCTTCCT TGACCACGGT CAGCGTGATT TCGGTTACGC GGTATTTGGT AAAGTGGTGA AAGGCATGGA CGTTGCCGAT AAGATTTCCC AGGTGCCGAC TCATGACGTT GGTCCGTACC AGAATGTGCC GTCAAAACCG GTAGTTATCC TTTCCGCTAA AGTGCTGCCG TAA
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Protein sequence | MFKSTLAAMA AVFALSALSP AAMAAKGDPH VLLTTSAGNI ELELDKQKAP VSVQNFVDYV NSGFYNNTTF HRVIPGFMIQ GGGFTEQMQQ KKPNPPIKNE ADNGLRNTRG TIAMARTADK DSATSQFFIN VADNAFLDHG QRDFGYAVFG KVVKGMDVAD KISQVPTHDV GPYQNVPSKP VVILSAKVLP
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