Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3642 |
Symbol | pabA |
ID | 6143954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3702395 |
End bp | 3702958 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618469 |
Product | para-aminobenzoate synthase component II |
Protein accession | YP_001745609 |
Protein GI | 170680557 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II |
TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000573837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCTGC TTATAGATAA CTACGATTCT TTTACCTGGA ACCTCTACCA GTACTTTTGT GAACTGGGGG CGGATGTGCT GGTTAAGCGC AACGATGCGT TGACGCTGGC GGATATCGAC GCCCTTAAAC CACAAAAAAT TGTCATCTCA CCCGGCCCCT GTACGCCAGA TGAAGCCGGG ATCTCCCTTG ACGTTATTCG CCACTATGCC GGGCGCTTGC CGATTCTTGG CGTCTGCCTC GGTCATCAGG CAATGGCGCA GGCATTTGGC GGTAAAGTTG TGCGCACCGC AAAGGTCATG CACGGCAAAA CCTCGCCGAT AACACATAAC GGTGAGGGCG TATTTCGGGG GCTGGCAAAT CCACTTACCG TGACACGCTA CCATTCGCTG GTGGTGGAAC CTGACTCATT ACCAGCGTGC TTTGACGTGA CGGCCTGGAG CGAAACCCGC GAGATTATGG GGATTCGCCA TCGCCAGTGG GATCTGGAAG GTGTGCAGTT CCATCCAGAA AGTATTCTTA GCGAACAAGG ACATCAACTG CTGGCTAATT TCCTGCATCG CTGA
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Protein sequence | MILLIDNYDS FTWNLYQYFC ELGADVLVKR NDALTLADID ALKPQKIVIS PGPCTPDEAG ISLDVIRHYA GRLPILGVCL GHQAMAQAFG GKVVRTAKVM HGKTSPITHN GEGVFRGLAN PLTVTRYHSL VVEPDSLPAC FDVTAWSETR EIMGIRHRQW DLEGVQFHPE SILSEQGHQL LANFLHR
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