| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3641 |
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| Symbol | argD |
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| ID | 6146675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3701086 |
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| End bp | 3702309 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618468 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001745608 |
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| Protein GI | 170679794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000165169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAATTG AACAAACAGC AATTACACGC GCGACTTTCG ATGAAGTGAT CCTGCCGATT
TATGCTCCGG CAGAGTTTAT TCCGGTAAAA GGTCAGGGCA GCCGAATCTG GGATCAGCAA
GGCAAGGAGT ATGTCGATTT CGCGGGTGGC ATTGCAGTTA CGGCGTTGGG CCATTGCCAT
CCTGCGCTGG TGAACGCGTT AAAAACCCAG GGCGAAACTC TGTGGCATAT CAGTAACGTT
TTCACCAATG AGCCGGCGCT GCGTCTTGGC CGTAAACTGA TTGAGGCAAC GTTTGCCGAA
CGCGTGGTGT TTATGAACTC CGGCACGGAA GCTAACGAAA CTGCCTTTAA ACTGGCACGC
CATTACGCCT GTGTGCGTCA TAGCCCGTTC AAAACCAAAA TTATCGCCTT CCATAACGCT
TTTCATGGTC GCTCGCTGTT TACCGTCTCG GTGGGCGGGC AACCAAAATA TTCCGATGGC
TTTGGGCCAA AACCGGCAGA CATCATCCAC GTTCCCTTTA ACGATCTCCA CGCAGTGAAA
GCGGTGATGG ATGATCACAC CTGTGCGGTG GTGGTTGAGC CGATCCAGGG CGAGGGCGGC
GTGACGGCAG CGACGCCAGA GTTTTTGCAG GGCTTGCGCG AGCTGTGCGA TCAACATCAG
GCATTATTGG TATTTGATGA AGTGCAGTGC GGGATGGGGC GGACCGGCGA TTTGTTTGCT
TACATGCACT ACGGCGTGAC GCCGGATATT CTGACCTCTG CGAAAGCGTT AGGCGGCGGC
TTCCCGATTA GCGCCATGCT GACCACGGCG GAAATTGCTT CTGCATTTCA TCCTGGTTCT
CACGGTTCCA CCTACGGCGG TAATCCTCTG GCCTGTGCAG TAGCGGGGGC GGCGTTTGAT
ATCATCAATA CCCCTGAAGT GCTGGAAGGC ATTCAGGCGA AACGTCAGCG TTTTGTTGAC
CATTTGCAGA AGATCGATCA GCAGTACGAT GTGTTTAGCG ATATTCGCGG TATGGGGCTA
TTGATTGGCG CAGAGCTGAA ACCACAGTAC AAAGGTCAGG CGCGTGATTT CCTGTATGCG
GGTGCAGAGG AAGGCGTAAT GGTGCTGAAT GCCGGGCCTG ATGTGATGCG TTTTGCGCCG
TCGCTGGTGG TGGAAGATGC GGATATCGAT GAAGGGATGC ATCGTTTCGC CCACGCGGTG
GCGAAGGTGA TTGGGGGTAA ATAA
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| Protein sequence | MAIEQTAITR ATFDEVILPI YAPAEFIPVK GQGSRIWDQQ GKEYVDFAGG IAVTALGHCH
PALVNALKTQ GETLWHISNV FTNEPALRLG RKLIEATFAE RVVFMNSGTE ANETAFKLAR
HYACVRHSPF KTKIIAFHNA FHGRSLFTVS VGGQPKYSDG FGPKPADIIH VPFNDLHAVK
AVMDDHTCAV VVEPIQGEGG VTAATPEFLQ GLRELCDQHQ ALLVFDEVQC GMGRTGDLFA
YMHYGVTPDI LTSAKALGGG FPISAMLTTA EIASAFHPGS HGSTYGGNPL ACAVAGAAFD
IINTPEVLEG IQAKRQRFVD HLQKIDQQYD VFSDIRGMGL LIGAELKPQY KGQARDFLYA
GAEEGVMVLN AGPDVMRFAP SLVVEDADID EGMHRFAHAV AKVIGGK
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