Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3630 |
Symbol | slyD |
ID | 6143103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3690037 |
End bp | 3690627 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618457 |
Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001745597 |
Protein GI | 170683250 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000861494 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000948305 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTAG CAAAAGACCT GGTGGTCAGC CTGGCCTATC AGGTACGTAC AGAAGACGGT GTGTTGGTTG ATGAGTCTCC GGTGAGTGCG CCGCTGGACT ACCTGCATGG TCACGGTTCC CTGATCTCTG GCCTGGAAAC GGCGCTGGAA GGTCACGAAG TTGGCGACAA ATTTGATGTC GCTGTTGGCG CGAACGACGC TTACGGTCAG TACGACGAAA ACCTGGTGCA ACGCGTTCCT AAAGACGTAT TTATGGGCGT TGATGAACTG CAGGTAGGTA TGCGTTTCCT GGCTGAAACC GACCAGGGTC CGGTACCGGT TGAAATCACT GCGGTTGAAG ACGATCACGT AGTGGTTGAT GGTAACCACA TGCTGGCTGG TCAGAACCTG AAATTCAACG TTGAAGTTGT GGCGATTCGC GAAGCGACCG AAGAAGAACT GGCTCATGGT CACGTTCACG GCGCGCACGA TCATCACCAC GATCACGACC ACGACGGTTG CTGCGGCGGT CATGGCCACG ATCACGGTCA TGAACACGGT GGCGAAGGCT GCTGCGGCGG TAAAGGTAAC GGCGGTTGCG GTTGCCACTA A
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Protein sequence | MKVAKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LISGLETALE GHEVGDKFDV AVGANDAYGQ YDENLVQRVP KDVFMGVDEL QVGMRFLAET DQGPVPVEIT AVEDDHVVVD GNHMLAGQNL KFNVEVVAIR EATEEELAHG HVHGAHDHHH DHDHDGCCGG HGHDHGHEHG GEGCCGGKGN GGCGCH
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