| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3626 |
|---|
| Symbol | tusD |
|---|
| ID | 6146407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3687461 |
|---|
| End bp | 3687847 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618453 |
|---|
| Product | sulfur transfer complex subunit TusD |
|---|
| Protein accession | YP_001745593 |
|---|
| Protein GI | 170681621 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
|---|
| TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000441818 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000993351 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTG CCATCGTGGT GACCGGGCCA GCATACGGTA CGCAACAGGC GAGTAGTGCT
TTTCAGTTTG CGCAGGCACT GATAGCCGAA GGCCATGAGT TAAGCTGCGT CTTTTTCTAT
CGGGAAGGGG TCTATAACGC TAACCAATTG ACCTCACCGG CAAGCGATGA ATTTGACCTT
GTGCGCGGCT GGCAACAGTT GAATGCGCAA CATGGTGTGG CGCTGAATAT CTGCGTAGCG
GCAGCGTTAC GCCGCGGTAT CGTCGATGAA ACTGAAGCAG GAAGGCTGGG GCTGGCTTCG
TCAAACCTTC AGTCGGGATT TACCTTAAGC GGACTTGGCG CGCTGGCGGA AGCCTCGCTG
ACCTGTGACA GGGTGGTACA GTTCTGA
|
|---|
| Protein sequence | MRFAIVVTGP AYGTQQASSA FQFAQALIAE GHELSCVFFY REGVYNANQL TSPASDEFDL
VRGWQQLNAQ HGVALNICVA AALRRGIVDE TEAGRLGLAS SNLQSGFTLS GLGALAEASL
TCDRVVQF
|
|---|
| |