Gene EcSMS35_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3618 
Symbol 
ID6142917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3680884 
End bp3681351 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content49% 
IMG OID641618444 
ProductA24 family peptidase 
Protein accessionYP_001745584 
Protein GI170682251 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000960523 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00521455 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCTA CCCTTCCCTT TCTGATTTTG TACGCTTGTT TATCAGCCCT ACTTTTTTTC 
TGGGATGCAA AGCATGGCTT GTTACCTGAC AGATTTACCT GCCCGTTACT CTGGTCAGGT
CTTTTGTTCT ATCAGGTTTG TAATCCTGAC GGTTTAGCCG ATGCGTTATG GGGGGCGATT
ATTGGTTACG GCACATTCGC TGTCATTTAC TGGGGGTATC GCATACTGCG TCATAAAGAA
GGATTAGGCT ATGGTGATGT GAAGTTTCTC GCCGCCCTTG GTGCCTGGCA TACATGGACC
TTCTTGCCAC GACTGGTTTT CCTTGCTGCC TCATTCGCTT GCGGAGCCGT AGTTATTGGT
CTGCTCATGA GAGGAAAAGA GTCATTAAAA AACCCGCTGC CGTTTGGGCC ATTTCTGGCG
GCTGCGGGTT TCGTTGTAGG CTGGGATAGT TTGCTGGCAG GCCGTTAA
 
Protein sequence
MDATLPFLIL YACLSALLFF WDAKHGLLPD RFTCPLLWSG LLFYQVCNPD GLADALWGAI 
IGYGTFAVIY WGYRILRHKE GLGYGDVKFL AALGAWHTWT FLPRLVFLAA SFACGAVVIG
LLMRGKESLK NPLPFGPFLA AAGFVVGWDS LLAGR