Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3618 |
Symbol | |
ID | 6142917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3680884 |
End bp | 3681351 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641618444 |
Product | A24 family peptidase |
Protein accession | YP_001745584 |
Protein GI | 170682251 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000960523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00521455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGCTA CCCTTCCCTT TCTGATTTTG TACGCTTGTT TATCAGCCCT ACTTTTTTTC TGGGATGCAA AGCATGGCTT GTTACCTGAC AGATTTACCT GCCCGTTACT CTGGTCAGGT CTTTTGTTCT ATCAGGTTTG TAATCCTGAC GGTTTAGCCG ATGCGTTATG GGGGGCGATT ATTGGTTACG GCACATTCGC TGTCATTTAC TGGGGGTATC GCATACTGCG TCATAAAGAA GGATTAGGCT ATGGTGATGT GAAGTTTCTC GCCGCCCTTG GTGCCTGGCA TACATGGACC TTCTTGCCAC GACTGGTTTT CCTTGCTGCC TCATTCGCTT GCGGAGCCGT AGTTATTGGT CTGCTCATGA GAGGAAAAGA GTCATTAAAA AACCCGCTGC CGTTTGGGCC ATTTCTGGCG GCTGCGGGTT TCGTTGTAGG CTGGGATAGT TTGCTGGCAG GCCGTTAA
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Protein sequence | MDATLPFLIL YACLSALLFF WDAKHGLLPD RFTCPLLWSG LLFYQVCNPD GLADALWGAI IGYGTFAVIY WGYRILRHKE GLGYGDVKFL AALGAWHTWT FLPRLVFLAA SFACGAVVIG LLMRGKESLK NPLPFGPFLA AAGFVVGWDS LLAGR
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