Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3612 |
Symbol | rplB |
ID | 6146224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3677778 |
End bp | 3678599 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618439 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001745579 |
Protein GI | 170683086 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000120655 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00428222 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGTTG TTAAATGTAA ACCGACATCT CCGGGTCGTC GCCACGTTGT TAAAGTGGTT AACCCTGAGC TGCACAAGGG CAAACCTTTT GCTCCGTTGC TGGAAAAAAA CAGCAAATCC GGTGGTCGTA ACAACAATGG CCGTATCACC ACTCGTCATA TCGGTGGTGG CCACAAGCAG GCTTACCGTA TTGTTGACTT CAAACGCAAC AAAGACGGTA TCCCGGCAGT TGTTGAACGT CTTGAGTACG ATCCGAACCG TTCCGCGAAC ATCGCGCTGG TTCTGTACAA AGACGGTGAA CGCCGTTACA TCCTGGCCCC TAAAGGCCTG AAAGCTGGCG ACCAGATTCA GTCTGGCGTT GATGCTGCAA TCAAACCAGG TAACACCCTG CCGATGCGCA ACATCCCGGT TGGTTCTACT GTTCATAACG TAGAAATGAA ACCAGGTAAA GGCGGTCAGC TGGCACGTTC CGCTGGTACT TACGTTCAGA TCGTTGCTCG TGATGGTGCT TATGTCACCC TGCGTCTGCG TTCTGGTGAA ATGCGTAAAG TAGAAGCAGA CTGCCGTGCA ACTCTGGGCG AAGTTGGCAA TGCTGAGCAT ATGCTGCGCG TTCTGGGTAA AGCAGGTGCT GCACGCTGGC GTGGTGTTCG TCCGACCGTT CGCGGTACCG CGATGAACCC GGTAGACCAC CCACATGGTG GTGGTGAAGG TCGTAACTTT GGTAAGCACC CGGTAACTCC GTGGGGCGTT CAGACCAAAG GTAAGAAGAC CCGCAGCAAC AAGCGTACTG ATAAATTCAT CGTACGTCGC CGTAGCAAAT AA
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Protein sequence | MAVVKCKPTS PGRRHVVKVV NPELHKGKPF APLLEKNSKS GGRNNNGRIT TRHIGGGHKQ AYRIVDFKRN KDGIPAVVER LEYDPNRSAN IALVLYKDGE RRYILAPKGL KAGDQIQSGV DAAIKPGNTL PMRNIPVGST VHNVEMKPGK GGQLARSAGT YVQIVARDGA YVTLRLRSGE MRKVEADCRA TLGEVGNAEH MLRVLGKAGA ARWRGVRPTV RGTAMNPVDH PHGGGEGRNF GKHPVTPWGV QTKGKKTRSN KRTDKFIVRR RSK
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