| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3610 |
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| Symbol | rplV |
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| ID | 6142663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3677136 |
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| End bp | 3677468 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618437 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001745577 |
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| Protein GI | 170683646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000037432 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00902859 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAAACTA TCGCTAAACA TCGCCATGCT CGTTCTTCTG CTCAGAAGGT TCGCCTTGTT
GCTGACCTGA TTCGCGGTAA GAAAGTGTCG CAGGCTCTGG ATATTTTGAC CTACACCAAC
AAGAAAGCGG CTGTACTGGT CAAGAAAGTT CTGGAATCTG CCATTGCTAA CGCTGAACAC
AACGATGGCG CTGACATTGA CGATCTGAAA GTTACGAAAA TTTTCGTAGA CGAAGGCCCG
AGCATGAAGC GCATTATGCC GCGTGCAAAA GGTCGTGCAG ATCGCATCCT GAAGCGCACC
AGCCACATCA CTGTGGTTGT GTCCGATCGC TGA
|
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| Protein sequence | METIAKHRHA RSSAQKVRLV ADLIRGKKVS QALDILTYTN KKAAVLVKKV LESAIANAEH
NDGADIDDLK VTKIFVDEGP SMKRIMPRAK GRADRILKRT SHITVVVSDR
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