| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3601 |
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| Symbol | rpsH |
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| ID | 6144702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3673388 |
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| End bp | 3673780 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618428 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001745568 |
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| Protein GI | 170681247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000126765 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0104758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAGGCCGCG
AACAAAGCTG CGGTCACCAT GCCTTCCTCC AAGCTGAAAG TGGCAATCGC CAACGTGCTG
AAGGAAGAAG GTTTTATTGA AGATTTTAAA GTTGAAGGCG ACACCAAGCC TGAACTGGAA
CTTACTCTGA AGTATTTCCA GGGCAAAGCT GTTGTAGAAA GCATTCAGCG TGTCAGCCGC
CCAGGTCTGC GCATCTATAA ACGTAAAGAT GAGCTGCCGA AAGTTATGGC GGGTCTGGGT
ATCGCAGTTG TTTCTACCTC TAAAGGTGTT ATGACTGATC GTGCAGCGCG CCAGGCTGGT
CTTGGTGGCG AAATTATCTG CTACGTAGCC TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NKAAVTMPSS KLKVAIANVL KEEGFIEDFK VEGDTKPELE
LTLKYFQGKA VVESIQRVSR PGLRIYKRKD ELPKVMAGLG IAVVSTSKGV MTDRAARQAG
LGGEIICYVA
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