Gene EcSMS35_3586 details

Gene Information

• Locus tag: EcSMS35_3586
• Symbol: mscL
• ID: 6144176
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 3665259
• End bp: 3665669
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641618413
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001745553
• Protein GI: 170680177
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.515412
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 39
• Fosmid unclonability p-value: 0.131611
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATTA TTAAAGAATT TCGCGAATTT GCGATGCGCG GGAACGTGGT GGATTTGGCG 
GTGGGTGTCA TTATCGGTGC GGCATTCGGG AAGATTGTAT CTTCACTGGT TGCCGATATC 
ATTATGCCAC CTCTGGGGTT ATTAATTGGC GGGATCGATT TCAAACAGTT TGCTGTCACG 
CTACGCGATG CGCAGGGGGA TATCCCTGCT GTTGTGATGC ATTACGGTGT CTTCATTCAA 
AACGTCTTTG ATTTTCTGAT TGTAGCCTTT GCCATCTTTA TGGCGATTAA GCTAATCAAC 
AAACTGAATC GGAAAAAAGA AGAACCAGCA GCCGCGCCTG CACCAACTAA AGAAGAAGTA 
TTACTGACAG AAATTCGTGA TTTGCTGAAA GAGCAGAATA ACCGCTCTTA A 

 

Protein sequence

MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVADI IMPPLGLLIG GIDFKQFAVT 
LRDAQGDIPA VVMHYGVFIQ NVFDFLIVAF AIFMAIKLIN KLNRKKEEPA AAPAPTKEEV 
LLTEIRDLLK EQNNRS