| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3564 |
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| Symbol | |
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| ID | 6147128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3647528 |
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| End bp | 3648709 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618392 |
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| Product | His/Glu/Gln/Arg/opine ABC transporter permease |
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| Protein accession | YP_001745539 |
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| Protein GI | 170682235 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.982473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCATC GCCGCTCAAC CGTTAAAGGC TCACTCTCCT TTGCCAACCC TACGGTTCGC
GCCTGGTTAT TCCAGATCCT TGCCGTTGTT GCTGTTGTTG GCATTGTTGG TTGGCTATTT
CACAACACTG TGACGAATCT CAGTAATCGT GGCATTACTT CAGGTTTTGC CTTTCTGGAT
CGCGGCGCTG GCTTCGGTAT TGTCCAGCAT TTGATCGATT ACCAGCAGGG TGATACCTAC
GGACGCGTTT TCATTGTTGG CTTACTCAAT ACGCTACTGG TTTCTGCATT GTGTATTGTA
TTCGCTTCTG TTCTGGGCTT CTTTATCGGT CTGGCGCGAC TTTCGGATAA CTGGCTGCTA
CGAAAGCTTT CCACAATTTA TATTGAGATC TTCCGTAATA TTCCGCCGCT GCTGCAAATC
TTCTTCTGGT ACTTTGCCGT GCTGCGCAAT TTGCCCGGAC CACGCCAGGC AGTGAGTGCG
TTTGATCTGG CCTTTTTGAG CAATCGTGGG CTTTATATTC CGTCGCCGCA GCTGGGAGAC
GGATTTATTG CGTTTATCCT GGCTGTTGTT ATGGCTATAG TCCTTTCTGT TGGGCTATTC
CGCTTTAATA AAACATACCA GATAAAAACC GGACAACTGC GCCGCACCTG GCCGATCGCC
GCAGTGTTGA TCATTGGTTT GCCTTTACTG GCGCAATGGC TTTTTGGCGC AGCACTACAC
TGGGATGTCC CAGCCCTTCG AGGCTTTAAT TTCCGCGGCG GGATGGTTTT AATTCCTGAA
CTGGCAGCCT TAACGCTGGC GCTTTCGGTT TATACTTCTG CATTTATCGC CGAAATTATC
CGCGCAGGGA TCCAGGCAGT GCCTTATGGT CAACATGAAG CAGCTCGGTC ACTGGGATTA
CCCAATCCGG TCACGCTACG CCAGGTCATT ATTCCCCAGG CATTGCGGGT GATTATTCCA
CCGTTAACCA GCCAGTATCT CAACATCGTC AAGAACTCCT CTCTTGCCGC CGCTATTGGC
TATCCCGATA TGGTTTCGCT GTTTGCTGGC ACCGTGCTGA ACCAAACGGG GCAAGCCATC
GAGACGATAG CCATGACCAT GTCGGTCTAT CTGATTATCA GCCTGACTAT CTCGCTGCTG
ATGAATATCT ATAACCGCCG CATCGCGATC GTTGAACGCT AA
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| Protein sequence | MSHRRSTVKG SLSFANPTVR AWLFQILAVV AVVGIVGWLF HNTVTNLSNR GITSGFAFLD
RGAGFGIVQH LIDYQQGDTY GRVFIVGLLN TLLVSALCIV FASVLGFFIG LARLSDNWLL
RKLSTIYIEI FRNIPPLLQI FFWYFAVLRN LPGPRQAVSA FDLAFLSNRG LYIPSPQLGD
GFIAFILAVV MAIVLSVGLF RFNKTYQIKT GQLRRTWPIA AVLIIGLPLL AQWLFGAALH
WDVPALRGFN FRGGMVLIPE LAALTLALSV YTSAFIAEII RAGIQAVPYG QHEAARSLGL
PNPVTLRQVI IPQALRVIIP PLTSQYLNIV KNSSLAAAIG YPDMVSLFAG TVLNQTGQAI
ETIAMTMSVY LIISLTISLL MNIYNRRIAI VER
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