| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3563 |
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| Symbol | |
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| ID | 6145678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3646435 |
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| End bp | 3647460 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618391 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001745538 |
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| Protein GI | 170682914 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TGATGATAGC CACACTGGCT GCCGCCAGCG TGCTGCTTGC CGTTGCAAAT
CAGGCGCATG CTGGCGCGAC GCTTGATGCC GTACAGAAAA AAGGTTTTGT GCAATGCGGG
ATCAGTGATG GATTACCTGG GTTCTCTTAT GCCGATGCTG ACGGTAAATT TTCAGGTATT
GATGTTGATA TTTGTCGTGG TGTTGCCGCT GCTGTATTTG GTGACGACAC GAAAGTGAAA
TATACCCCGC TCACTGCAAA AGAACGCTTC ACCGCTTTAC AGTCAGGGGA GGTGGATTTG
CTCTCCCGTA ATACGACCTG GACTTCATCT CGCGATGCCG GGATGGGAAT GGCATTTACC
GGCGTCACTT ATTACGACGG CATTGGCTTC CTGACTCACG ATAAAGCGGG ACTAAAAAGC
GCGAAAGAAC TGGATGGCGC TACCGTCTGT ATTCAGGCGG GTACTGATAC CGAACTCAAC
GTTGCCGATT ACTTTAAGGC AAACAATATG AAGTACACAC CAGTGACTTT CGATCGCTCT
GACGAATCAG CGAAGGCACT GGAATCTGGT CGCTGCGATA CGCTGGCCTC GGATCAATCA
CAACTGTATG CCCTGCGCAT CAAATTAAGC AACCCGGCTG AATGGATTGT CTTACCGGAA
GTTATCTCCA AAGAACCGCT TGGGCCGGTA GTTCGCCGTG GCGATGATGA ATGGTTCTCG
ATTGTACGCT GGACGCTTTT CGCCATGCTG AATGCTGAAG AGATGGGCAT CAATTCCCAG
AACGTCGATG AAAAAGCGGC TAATCCGGCA ACGCCTGATA TGGCACATCT GCTGGGTAAA
GAAGGCGATT ACGGCAAGGA TCTGAAGCTG GATAATAAAT GGGCTTACAA CATCATCAAA
CAGGTGGGTA ACTACTCGGA AATTTTTGAG CGTAACGTAG GTTCAGAAAG CCCGCTGAAA
ATTAAACGTG GGCAAAATAA TCTCTGGAAT AACGGCGGAA TTCAGTACGC GCCGCCCGTG
CGTTAA
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| Protein sequence | MKKMMIATLA AASVLLAVAN QAHAGATLDA VQKKGFVQCG ISDGLPGFSY ADADGKFSGI
DVDICRGVAA AVFGDDTKVK YTPLTAKERF TALQSGEVDL LSRNTTWTSS RDAGMGMAFT
GVTYYDGIGF LTHDKAGLKS AKELDGATVC IQAGTDTELN VADYFKANNM KYTPVTFDRS
DESAKALESG RCDTLASDQS QLYALRIKLS NPAEWIVLPE VISKEPLGPV VRRGDDEWFS
IVRWTLFAML NAEEMGINSQ NVDEKAANPA TPDMAHLLGK EGDYGKDLKL DNKWAYNIIK
QVGNYSEIFE RNVGSESPLK IKRGQNNLWN NGGIQYAPPV R
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