| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3553 |
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| Symbol | panF |
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| ID | 6145517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3635007 |
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| End bp | 3636458 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618382 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_001745529 |
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| Protein GI | 170679603 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000280994 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG AAGTGATTCT ACCGCTGGTC GCCTATCTGG TGGTGGTGTT CGGGATTTCA
GTTTATGCAA TGCGTAAACG GAACACCGGC ACCTTCCTCA ATGAGTATTT CCTCGGCAGC
CGTTCTATGG GCGGTATTGT GCTGGCGATG ACACTCACCG CGACCTATAT CAGTGCCAGT
TCGTTTATCG GCGGGCCTGG AGCTGCTTAT AAATACGGCC TGGGCTGGGT ATTGCTGGCG
ATGATTCAGC TTCCTGCAGT CTGGCTTTCG CTCGGTATTC TCGGCAAGAA GTTCGCAATT
CTTGCGCGCC GCTACAATGC GGTGACGCTG AACGATATGC TGTTTGCCCG CTACCAGAGT
CGTCTGCTGG TGTGGCTGGC GAGTTTAAGT TTGCTGGTTG CGTTCGTTGG TGCGATGACC
GTGCAGTTTA TCGGCGGTGC GCGTCTGCTG GAAACTGCGG CGGGTATCCC TTATGAAACC
GGGCTGCTGA TTTTCGGTAT CAGCATTGCG TTGTATACCG CCTTTGGTGG CTTTCGCGCC
AGCGTGCTGA ACGACACCAT GCAAGGGCTG GTGATGCTGA TTGGCACCAT TGTGCTGCTT
ATTGGCGTGG TACATGCCGC AGGTGGCTTA AGCAACGCAG TAGAGACGTT GCAAACCATC
GATCCGCAAC TGGTTACTCC GCAAGGCGCT GACGATATTC TGTCGCCTGC CTTTATGACA
TCGTTCTGGG TGCTGGTGTG CTTTGGTGTG ATTGGTCTGC CGCATACCGC TGTGCGCTGC
ATCTCTTATA AAGACAGCAA AGCGGTACAT CGGGGAATCA TCATCGGGAC AATTGTAGTG
GCAGTCCTGA TGTTTGGTAT GCACCTGGCC GGAGCGTTAG GCCGTGCGGT GATCCCCGAT
CTCACCGTAC CGGATCTGGT GATCCCGACG TTAATGGTAA AAGTGCTGCC ACCGTTTGCT
GCCGGGATCT TCCTGGCTGC ACCTATGGCT GCGATCATGT CGACGATCAA TGCCCAGTTG
CTGCAAAGTT CCGCTACGAT CATTAAAGAT CTCTATCTGA ATATCCGTCC GGATCAAATG
CAAAACGAGA CGCGTCTGAA GCGGATGTCG GCGGTGATCA CGTTGGTTCT CGGTGCGTTG
CTGCTGCTTG CCGCCTGGAA GCCGCCAGAA ATGATCATCT GGCTGAATTT GCTGGCCTTC
GGTGGGCTGG AAGCCGTTTT CCTGTGGCCG CTGGTACTGG GTCTTTACTG GGAACGCGCC
AACGCCAAAG GCGCGCTAAG TGCGATGATT GTTGGCGGCG TACTGTATGC CGTACTCGCG
ACGCTGAATA TTCAGTACCT GGGCTTCCAC CCTATCGTGC CCTCGTTACT ACTAAGTTTG
CTGGCTTTCA TGGTCGGAAA CCGTTTCGGT ACATCCGTCC CGCAAGCTAC CGTTTTGACT
ACTGATAAAT AA
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| Protein sequence | MQLEVILPLV AYLVVVFGIS VYAMRKRNTG TFLNEYFLGS RSMGGIVLAM TLTATYISAS
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGILGKKFAI LARRYNAVTL NDMLFARYQS
RLLVWLASLS LLVAFVGAMT VQFIGGARLL ETAAGIPYET GLLIFGISIA LYTAFGGFRA
SVLNDTMQGL VMLIGTIVLL IGVVHAAGGL SNAVETLQTI DPQLVTPQGA DDILSPAFMT
SFWVLVCFGV IGLPHTAVRC ISYKDSKAVH RGIIIGTIVV AVLMFGMHLA GALGRAVIPD
LTVPDLVIPT LMVKVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLNIRPDQM
QNETRLKRMS AVITLVLGAL LLLAAWKPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAKGALSAMI VGGVLYAVLA TLNIQYLGFH PIVPSLLLSL LAFMVGNRFG TSVPQATVLT
TDK
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