Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3545 |
Symbol | mreC |
ID | 6147497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3625520 |
End bp | 3626623 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641618374 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001745521 |
Protein GI | 170680238 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000398804 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAA TTTTTAGCCG TGGCCCGTCG CTACAGATTC GCCTTATTCT GGCGGTGCTG GTGGCGCTCG GCATTATTAT TGCCGACAGC CGCCTGGGGA CGTTCAGTCA AATCCGTACT TATATGGATA CCGCCGTCAG CCCTTTCTAC TTTGTTTCCA ATGCTCCTCG TGAATTGCTG GATGGCGTAT CGCAGACGCT GGCCTCGCGT GACCAACTAG AACTTGAAAA CCGGGCGTTA CGTCAGGAAC TGTTGCTGAA AAACAGTGAA CTGCTGATGC TTGGACAATA CAAACAGGAG AACGCGCGTC TGCGCGAACT GCTGGGTTCC CCGCTGCGTC AGGATGAGCA GAAAATGGTG ACTCAGGTTA TCTCCACGGT TAACGACCCT TATAGCGATC AAGTTGTTAT CGATAAAGGT AGCGTTAATG GCGTTTATGA AGGCCAGCCG GTCATCAGCG ACAAAGGTGT TGTTGGTCAG GTGGTGGCCG TCGCTAAACT GACCAGTCGC GTGCTGCTGA TTTGTGATGC GACCCACGCG CTGCCAATCC AGGTGCTGCG CAACGATATC CGCGTAATTG CAGCCGGTAA CGGTTGTACG GATGATTTGC AGCTTGAGCA TTTGCCAGCG AATACGGATA TTCGTGTTGG TGATGTGCTG GTGACTTCCG GTCTGGGCGG TCGTTTCCCG GAAGGCTATC CGGTCGCGGT TGTCTCTTCC GTAAAACTCG ATACCCAGCG CGCTTATACT GTGATTCAGG CGCGTCCGAC TGCAGGGCTG CAACGTTTGC GTTATCTGCT GCTGCTGTGG GGCGCGGATC GTAACGGCGC TAACCCGATG ACGCCGGAAG AGGTGCATCG TGTTGCTAAT GAACGTCTGA TGCAGATGAT GCCGCAGGTA TTGCCTTCAC CAGACGCGAT GGGGCCAAAG TTACCCGAAC CGGCAACGGG GATCGCTCAG CCGACTCCGC AGCAACCGGC GACAGGAAAT GCAGCTACTG CGCCTGCTGC GCCGACACAG CCCGCTGCTA ATCGCTCTCC ACAAAGGGCT ACGCCGCCGC AAAGTGGTGC TCAACCGCCT GCGCGTGCGC CGGGAGGGCA ATAG
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Protein sequence | MKPIFSRGPS LQIRLILAVL VALGIIIADS RLGTFSQIRT YMDTAVSPFY FVSNAPRELL DGVSQTLASR DQLELENRAL RQELLLKNSE LLMLGQYKQE NARLRELLGS PLRQDEQKMV TQVISTVNDP YSDQVVIDKG SVNGVYEGQP VISDKGVVGQ VVAVAKLTSR VLLICDATHA LPIQVLRNDI RVIAAGNGCT DDLQLEHLPA NTDIRVGDVL VTSGLGGRFP EGYPVAVVSS VKLDTQRAYT VIQARPTAGL QRLRYLLLLW GADRNGANPM TPEEVHRVAN ERLMQMMPQV LPSPDAMGPK LPEPATGIAQ PTPQQPATGN AATAPAAPTQ PAANRSPQRA TPPQSGAQPP ARAPGGQ
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