Gene EcSMS35_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3545 
SymbolmreC 
ID6147497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3625520 
End bp3626623 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content56% 
IMG OID641618374 
Productrod shape-determining protein MreC 
Protein accessionYP_001745521 
Protein GI170680238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000398804 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAA TTTTTAGCCG TGGCCCGTCG CTACAGATTC GCCTTATTCT GGCGGTGCTG 
GTGGCGCTCG GCATTATTAT TGCCGACAGC CGCCTGGGGA CGTTCAGTCA AATCCGTACT
TATATGGATA CCGCCGTCAG CCCTTTCTAC TTTGTTTCCA ATGCTCCTCG TGAATTGCTG
GATGGCGTAT CGCAGACGCT GGCCTCGCGT GACCAACTAG AACTTGAAAA CCGGGCGTTA
CGTCAGGAAC TGTTGCTGAA AAACAGTGAA CTGCTGATGC TTGGACAATA CAAACAGGAG
AACGCGCGTC TGCGCGAACT GCTGGGTTCC CCGCTGCGTC AGGATGAGCA GAAAATGGTG
ACTCAGGTTA TCTCCACGGT TAACGACCCT TATAGCGATC AAGTTGTTAT CGATAAAGGT
AGCGTTAATG GCGTTTATGA AGGCCAGCCG GTCATCAGCG ACAAAGGTGT TGTTGGTCAG
GTGGTGGCCG TCGCTAAACT GACCAGTCGC GTGCTGCTGA TTTGTGATGC GACCCACGCG
CTGCCAATCC AGGTGCTGCG CAACGATATC CGCGTAATTG CAGCCGGTAA CGGTTGTACG
GATGATTTGC AGCTTGAGCA TTTGCCAGCG AATACGGATA TTCGTGTTGG TGATGTGCTG
GTGACTTCCG GTCTGGGCGG TCGTTTCCCG GAAGGCTATC CGGTCGCGGT TGTCTCTTCC
GTAAAACTCG ATACCCAGCG CGCTTATACT GTGATTCAGG CGCGTCCGAC TGCAGGGCTG
CAACGTTTGC GTTATCTGCT GCTGCTGTGG GGCGCGGATC GTAACGGCGC TAACCCGATG
ACGCCGGAAG AGGTGCATCG TGTTGCTAAT GAACGTCTGA TGCAGATGAT GCCGCAGGTA
TTGCCTTCAC CAGACGCGAT GGGGCCAAAG TTACCCGAAC CGGCAACGGG GATCGCTCAG
CCGACTCCGC AGCAACCGGC GACAGGAAAT GCAGCTACTG CGCCTGCTGC GCCGACACAG
CCCGCTGCTA ATCGCTCTCC ACAAAGGGCT ACGCCGCCGC AAAGTGGTGC TCAACCGCCT
GCGCGTGCGC CGGGAGGGCA ATAG
 
Protein sequence
MKPIFSRGPS LQIRLILAVL VALGIIIADS RLGTFSQIRT YMDTAVSPFY FVSNAPRELL 
DGVSQTLASR DQLELENRAL RQELLLKNSE LLMLGQYKQE NARLRELLGS PLRQDEQKMV
TQVISTVNDP YSDQVVIDKG SVNGVYEGQP VISDKGVVGQ VVAVAKLTSR VLLICDATHA
LPIQVLRNDI RVIAAGNGCT DDLQLEHLPA NTDIRVGDVL VTSGLGGRFP EGYPVAVVSS
VKLDTQRAYT VIQARPTAGL QRLRYLLLLW GADRNGANPM TPEEVHRVAN ERLMQMMPQV
LPSPDAMGPK LPEPATGIAQ PTPQQPATGN AATAPAAPTQ PAANRSPQRA TPPQSGAQPP
ARAPGGQ