| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3539 |
|---|
| Symbol | aaeR |
|---|
| ID | 6142733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3616445 |
|---|
| End bp | 3617374 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641618368 |
|---|
| Product | putative DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_001745515 |
|---|
| Protein GI | 170684070 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAC TAAAACGCAT GTCGGTGTTT GCCAAAGTAG TTGAATTTGG CTCTTTTACC
GCCGCCGCCA GACAGCTACA GATGAGCGTT TCGTCCATCA GTCAGACGGT GTCAAAACTG
GAAGATGAGT TACAGGTAAA GCTGTTAAAC CGTAGCACAC GCAGCATTGG CCTGACCGAA
GCCGGTAGAA TTTACTACCA GGGCTGCCGT CGGATGCTCC ATGAAGTGCA GGATGTTCAT
GAGCAACTGT ATGCCTTCAA TAACACCCCC ATCGGGACGC TGCGCATTGG CTGTTCTTCA
ACTATGGCAC AAAATGTTCT CGCCGGGCTG ACAGCAAAAA TGCTGAAAGA ATACCCAGGT
TTGAGCGTCA ATCTGGTTAC CGGAATTCCT GCCCCCGACC TGATTGCCGA TGGTCTGGAT
GTGGTGATCC GCGTCGGCGC GTTGCAGGAT TCCAGCCTGT TTTCCCGCCG TCTGGGCGCG
ATGCCGATGG TGGTGTGCGC CGCGAAAAGC TATCTCACAC AATACGGCAT ACCGGAAAAA
CCCGCCGATT TGAGTAGTCA TTCATGGCTT GAATACAGCG TGCGGCCCGA CAATGAATTT
GAACTGATCG CACCGGAAGG GATCTCGACT CGCCTGATCC CACAAGGAAG ATTTGTGACT
AATGATCCGA TGACGCTGGT GCGCTGGCTG ACGGCGGGTG CCGGGATCGC CTACGTGCCG
CTGATGTGGG TGATCAACGA GATCAATCGC GGGGAACTGG AGATCCTGCT GCCGCGTTAC
CAGTCAGATC CACGCCCGGT TTATGCGTTG TATACCGAAA AAGATAAGCT ACCGCTGAAG
GTACAGGTCG TGATCAACTC GCTGACGGAT TATTTTGTTG AGGTCGGTAA ATTGTTTCAG
GAGATGCACG GGCGCGGGAA AGAGAAGTAA
|
|---|
| Protein sequence | MERLKRMSVF AKVVEFGSFT AAARQLQMSV SSISQTVSKL EDELQVKLLN RSTRSIGLTE
AGRIYYQGCR RMLHEVQDVH EQLYAFNNTP IGTLRIGCSS TMAQNVLAGL TAKMLKEYPG
LSVNLVTGIP APDLIADGLD VVIRVGALQD SSLFSRRLGA MPMVVCAAKS YLTQYGIPEK
PADLSSHSWL EYSVRPDNEF ELIAPEGIST RLIPQGRFVT NDPMTLVRWL TAGAGIAYVP
LMWVINEINR GELEILLPRY QSDPRPVYAL YTEKDKLPLK VQVVINSLTD YFVEVGKLFQ
EMHGRGKEK
|
|---|
| |