| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3519 |
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| Symbol | nanT1 |
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| ID | 6143258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3598009 |
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| End bp | 3599499 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618348 |
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| Product | putative sialic acid transporter |
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| Protein accession | YP_001745495 |
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| Protein GI | 170683321 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.434563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA CAACCCAGAA TATCCCGTGG TATCGCCATC TTAACCGCGC ACAATGGCGG
GCATTTTCCG CTGCCTGGTT GGGATATCTG CTTGACGGTT TTGATTTCGT TTTAATCGCC
CTGGTACTCA CCGAAGTACA GGGTGAATTC GGGCTGACGA CGGTGCAGGC GGCAAGTCTG
ATCTCCGCAG CCTTTATCTC TCGCTGGTTC GGCGGCCTGA TGCTCGGCGC TATGGGTGAC
CGCTACGGGC GTCGTCTGGC AATGGTCACC AGCATCGTTC TCTTCTCGGC CGGGACGCTG
GCCTGCGGCT TTGCGCCAGG CTACATCACC ATGTTTATCG CTCGTCTGGT CATCGGCATG
GGGATGGCGG GTGAATACGG TTCCAGCGCC ACCTATGTCA TTGAAAGCTG GCCAAAGCAT
CTGCGTAACA AAGCCAGTGG TTTTCTGATT TCCGGCTTCT CAGTGGGGGC CGTCGTTGCC
GCTCAGGTCT ATAGCCTGGT GGTTCCGGTC TGGGGCTGGC GTGCGCTGTT CTTTATCGGC
ATTTTGCCAA TCATCTTTGC TCTCTGGCTG CGTAAAAACA TCCCGGAAGC GGAAGACTGG
AAAGAGAAAC ACGGGGGTAA AGCACCGGTA CGCACGATGG TAGACATTCT TTACCGTGGT
GAACATCGCA TTGCCAATAT CGTAATGACA CTGGCGGCGG CTACTGCGCT GTGGTTCTGC
TTCGCCGGTA ACCTGCAAAA TGCCGCGATC GTCGCTGTTC TTGGGCTGTT ATGCGCCGCA
ATCTTTATCA GCTTTATGGT GCAGAGTACG GGCAAACGCT GGCCAACGGG CGTAATGCTG
ATGGTGGTCG TGTTGTTTGC TTTCCTCTAC TCATGGCCGA TTCAGGCGCT GCTGCCAACG
TATCTGAAAA CCGATCTGGC TTATGACCCG CATACTGTCG CCAATGTGCT GTTCTTTAGT
GGCTTTGGCG CGGCGGTGGG GTGCTGCGTC GGTGGCTTCC TCGGTGACTG GCTGGGAACC
CGCAAAGCGT ACGTTTGTAG TCTGCTGGCC TCGCAGCTGC TGATTATTCC GGTATTTGCG
ATTGGCGGCG CAAACGTCTG GGTGCTCGGT CTGTTACTGT TCTTCCAGCA AATGCTTGGA
CAAGGGATCG CCGGGATCTT ACCGAAACTG ATTGGCGGTT ATTTCGATAC CGACCAGCGT
GCAGCGGGCC TGGGCTTTAC CTACAACGTT GGCGCATTGG GCGGCGCACT GGCCCCAATC
ATCGGCGCGT TGATCGCTCA ACGTCTGGAT CTGGGTACTG CGCTGGCATC GCTCTCGTTC
AGTTTGACGT TTGTGGTGAT CCTGCTGATT GGTCTGGATA TGCCTTCTCG CGTTCAGCGT
TGGCTGCGCC CGGAAGCATT GCGTACTCAT GACGCTATCG ACGGCAAACC ATTTAGCGGT
GCCGTGCCAT TTGGCAGCGC CAAAAACGAT TTAGTCAAAA CCAAAAGTTA A
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| Protein sequence | MSTTTQNIPW YRHLNRAQWR AFSAAWLGYL LDGFDFVLIA LVLTEVQGEF GLTTVQAASL
ISAAFISRWF GGLMLGAMGD RYGRRLAMVT SIVLFSAGTL ACGFAPGYIT MFIARLVIGM
GMAGEYGSSA TYVIESWPKH LRNKASGFLI SGFSVGAVVA AQVYSLVVPV WGWRALFFIG
ILPIIFALWL RKNIPEAEDW KEKHGGKAPV RTMVDILYRG EHRIANIVMT LAAATALWFC
FAGNLQNAAI VAVLGLLCAA IFISFMVQST GKRWPTGVML MVVVLFAFLY SWPIQALLPT
YLKTDLAYDP HTVANVLFFS GFGAAVGCCV GGFLGDWLGT RKAYVCSLLA SQLLIIPVFA
IGGANVWVLG LLLFFQQMLG QGIAGILPKL IGGYFDTDQR AAGLGFTYNV GALGGALAPI
IGALIAQRLD LGTALASLSF SLTFVVILLI GLDMPSRVQR WLRPEALRTH DAIDGKPFSG
AVPFGSAKND LVKTKS
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