Gene EcSMS35_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3505 
SymbolelbB 
ID6145491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3576419 
End bp3577072 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID641618334 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001745481 
Protein GI170683821 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TTGGCGTAAT TCTGAGCGGA TGCGGCGTCT ATGACGGTTC TGAAATTCAT 
GAAGCGGTGT TGACGTTGTT AGCTATTTCA CGCAGCGGTG CGCAGGCGGT CTGCTTTGCA
CCGGATAAGC AGCAGGTTGA TGTAATCAAT CATTTAACTG GCGAAGCGAT GCCGGAAACG
CGCAATGTGC TGATTGAAGC GGCACGAATA ACGCGTGGTG AGATCCGCCC TCTGGCCCAG
GCCGATGCCG CTGAGCTGGA TGCGTTGATT GTGCCGGGGG GGTTTGGTGC GGCGAAGAAT
TTAAGCAACT TTGCCCGTCT GGGGAGTGAA TGCACCGTTG ACCGTGAATT AAAGGCGCTG
GCACAAGCGA TGCATCAGGC CGGAAAACCG CTTGGTTTTA TGTGTATTGC CCCGGCGATG
CTGCCGAAAA TTTTCGATTT CCCGCTGCGT TTGACCATCG GTACTGATAT TGATACCGCA
GAAGTGCTGG AAGAGATGGG CGCGGAGCAT GTGCCGTGTC CTGTCGATGA TATCGTGGTT
GATGAAGACA ATAAGATTGT CACCACCCCT GCATATATGC TGGCGCAGAA CATTGCAGAA
GCGGCGAGCG GCATTGATAA GCTGGTTTCC CGCGTGCTGG TCCTGGCGGA ATGA
 
Protein sequence
MKKIGVILSG CGVYDGSEIH EAVLTLLAIS RSGAQAVCFA PDKQQVDVIN HLTGEAMPET 
RNVLIEAARI TRGEIRPLAQ ADAAELDALI VPGGFGAAKN LSNFARLGSE CTVDRELKAL
AQAMHQAGKP LGFMCIAPAM LPKIFDFPLR LTIGTDIDTA EVLEEMGAEH VPCPVDDIVV
DEDNKIVTTP AYMLAQNIAE AASGIDKLVS RVLVLAE