Gene EcSMS35_3494 details

Gene Information

• Locus tag: EcSMS35_3494
• Symbol: kdsC
• ID: 6144019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 3568886
• End bp: 3569452
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641618323
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_001745470
• Protein GI: 170681509
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 57
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAAAG CAGGTGCGTC GCTTGCGACC TGTTACGGCC CTGTCAGCGC CGACGTTATG 
GCAAAAGCAG AGAATATTCG TCTGCTGATC CTCGATGTCG ATGGCGTACT GTCAGATGGC 
CTGATTTATA TGGGCAATAA TGGCGAAGAG CTGAAAGCGT TCAATGTTCG TGACGGTTAT 
GGCATTCGTT GTGCGCTCAC CTCTGATATT GAAGTCGCTA TCATTACCGG GCGAAAGGCT 
AAACTGGTAG AAGATCGTTG TGCCACATTG GGGATCACTC ACTTGTATCA GGGGCAGTCA 
AACAAACTGA TCGCCTTTAG CGATCTGCTG GAAAAACTGG CGATTGCCCC GGAAAATGTG 
GCTTATGTCG GCGATGATCT CATCGACTGG CCGGTAATGG AAAAAGTGGG GTTAAGCGTC 
GCCGTGGCCG ATGCGCATCC ACTGTTGATC CCGCGCGCCG ATTACGTGAC GCGCATTGCT 
GGCGGTCGTG GCGCAGTGCG AGAAGTTTGC GACTTATTAC TCCTGGCGCA GGGCAAACTG 
GATGAAGCCA AAGGGCAATC GATATGA 

 

Protein sequence

MSKAGASLAT CYGPVSADVM AKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY 
GIRCALTSDI EVAIITGRKA KLVEDRCATL GITHLYQGQS NKLIAFSDLL EKLAIAPENV 
AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTRIA GGRGAVREVC DLLLLAQGKL 
DEAKGQSI