Gene EcSMS35_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3489 
Symbol 
ID6146736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3564523 
End bp3565074 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content49% 
IMG OID641618318 
ProductMce family protein 
Protein accessionYP_001745465 
Protein GI170682506 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA AAAAAAATGA AATTTGGGTG GGTATCTTTT TATTAGCAGC ACTGCTTGCG 
GCGCTTTTTG TTTGCCTGAA GGCAGCGAAC GTGACGTCTA TACGTACTGA ACCGACCTAT
ACGCTTTATG CGACGTTCGA TAACATTGGC GGCCTGAAAG CGCGCTCTCC GGTCAGCATT
GGTGGCGTTG TTGTGGGCCG GGTGGCGGAT ATTACGCTGG ACCCGAAAAC CTATCTGCCA
CGCGTAACGC TGGAAATTGA ACAACGTTAT AACCACATTC CTGATACCAG TTCGCTGAGC
ATTCGTACTT CCGGCCTGCT GGGGGAACAA TATCTGGCAT TAAACGTCGG TTTTGAAGAC
CCGGAACTGG GGACTGCTAT CCTGAAGGAT GGCGATACAA TTCAGGACAC CAAGTCTGCG
ATGGTGCTGG AAGATCTCAT TGGTCAGTTC CTTTACGGTA GTAAAGGCGA TGACAATAAG
AATAGTGGCG ATGCGCCTGC TGCTGCGCCA GGTAATAATG AAACCACTGA ACCTGTGGGT
ACAACGAAAT AA
 
Protein sequence
MQTKKNEIWV GIFLLAALLA ALFVCLKAAN VTSIRTEPTY TLYATFDNIG GLKARSPVSI 
GGVVVGRVAD ITLDPKTYLP RVTLEIEQRY NHIPDTSSLS IRTSGLLGEQ YLALNVGFED
PELGTAILKD GDTIQDTKSA MVLEDLIGQF LYGSKGDDNK NSGDAPAAAP GNNETTEPVG
TTK