| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3459 |
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| Symbol | nlpI |
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| ID | 6143616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3534796 |
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| End bp | 3535680 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618288 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001745437 |
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| Protein GI | 170682635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.354036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTT TTTTGCGCTG GTGTTTCGTT GCGACAGCAC TTACGCTTGC AGGATGCAGT
AATACTTCCT GGCGTAAAAG TGAAGTCCTC GCGGTACCAT TGCAACCGAC TTTACAGCAG
GAAGTGATTC TGGCACGTAT GGAACAAATC CTTGCCAGTC GGGCTTTAAC CGATGACGAA
CGCGCACAGC TTTTATATGA GCGCGGAGTG TTGTATGATA GTCTCGGTCT GAGGGCATTA
GCGCGTAACG ATTTTTCGCA AGCGCTGGCA ATCCGACCGG ATATGCCTGA AGTATTCAAT
TACTTAGGCA TATATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT
TCTGTACTTG AGCTTGATCC AACTTACAAC TACGCGCACT TGAATCGCGG GATCGCATTA
TATTACGGCG GTCGTGACAA GTTAGCGCAA GATGATCTGC TGGCGTTTTA TCAAGACGAT
CCTAATGATC CTTTCCGTAG TCTGTGGCTT TATCTCGCCG AGCAGAAGCT CGATGAGAAG
CAGGCTAAAG AAGTGTTGAA ACAGCACTTC GAAAAATCGG ATAAGGAACA GTGGGGATGG
AACATTGTCG AGTTCTACCT GGGCAACATT AGCGAACAAA CGTTAATGGA AAGGCTCAAG
GCGGACGCAA CGGATAACAC CTCGCTCGCT GAGCATCTCA GTGAAACCAA CTTCTATTTA
GGTAAGTACT ACCTAAGTCT GGGGGATTTG GACAGCGCCA CGGCACTGTT CAAACTGGCG
GTTGCCAACA ACGTTCATAA CTTTGTTGAG CACCGATACG CATTGTTGGA ATTATCGCTC
CTGGGCCAGG ACCAAGATGA CCTGGCAGAA TCGGACCAGC AATAG
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| Protein sequence | MKPFLRWCFV ATALTLAGCS NTSWRKSEVL AVPLQPTLQQ EVILARMEQI LASRALTDDE
RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD
SVLELDPTYN YAHLNRGIAL YYGGRDKLAQ DDLLAFYQDD PNDPFRSLWL YLAEQKLDEK
QAKEVLKQHF EKSDKEQWGW NIVEFYLGNI SEQTLMERLK ADATDNTSLA EHLSETNFYL
GKYYLSLGDL DSATALFKLA VANNVHNFVE HRYALLELSL LGQDQDDLAE SDQQ
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