| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3456 |
|---|
| Symbol | |
|---|
| ID | 6143348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3530203 |
|---|
| End bp | 3531210 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641618285 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001745434 |
|---|
| Protein GI | 170679737 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA AAACCATTGC GTTTTCGCTA CTCGATCTGG CCCCCATCCC CGAAGGCTCT
TCAGCGCGAG AAGCGTTCTC CCACTCTCTC GATCTCGCCC GTCTGGCTGA AAAGCACGGC
TATCATCGCT ACTGGCTGGC AGAACACCAC AATATGACCG GTATTGCCAG TGCTGCAACG
TCGGTGTTAA TTGGCTATCT GGCGGCGAAT ACCACCACGC TGCATCTGGG GTCTGGCGGC
GTGATGTTGC CTAACCACTC ACCGTTGGTG ATCGCCGAAC AATTCGGCAC GCTCAATACG
CTCTATCCGG GGCGAATCGA TTTGGGGCTG GGCCGCGCGC CGGGTAGCGA TCAGCGAACC
ATGATGGCGC TGCGTCGTCA TATGAGCGGC GATATTGATA ATTTCCCCCG CGATGTCGCG
GAACTGGTGG ACTGGTTTGA CGCCCGCGAT CCCAATCCGC ATGTGCGCCC GGTACCAGGC
TATGGCGAGA AAATCCCCGT GTGGTTGTTA GGCTCCAGCC TTTACAGCGC GCAACTGGCG
GCGCAGCTTG GTCTGCCGTT TGCGTTTGCC TCACACTTCG CGCCGGATAT GTTGTTCCAG
GCGCTGCATC TTTATCGCAG CAACTTCAAA CCGTCGGCAC GGTTGGAGAA ACCGTATGCG
ATGGTGTGCA TCAATATTAT CGCCGCCGAC AGCAACCGCG ATGCCGAATT CCTGTTTACC
TCAATGCAGC AAGCCTTTGT GAAGCTGCGC CGCGGCGAAA CCGGGCAACT GCCGCCACCG
ATTCAAAATA TGGATCAGTT CTGGTCGCCG TCCGAACAGT ATGGTGTGCA GCAGGCGCTG
AGTATGTCGC TGGTGGGCGA TAAAGCGAAA GTGCGTCATG GCTTGCAGTC GATCCTGCGC
GAAACCGACG CCGATGAAAT TATGGTTAAC GGGCAGATTT TCGACCACCA GGCGCGCCTG
CATTCGTTTG AGCTGGTGAT GGATGTGAAG GAAGAATTAT TGGGGTAG
|
|---|
| Protein sequence | MTDKTIAFSL LDLAPIPEGS SAREAFSHSL DLARLAEKHG YHRYWLAEHH NMTGIASAAT
SVLIGYLAAN TTTLHLGSGG VMLPNHSPLV IAEQFGTLNT LYPGRIDLGL GRAPGSDQRT
MMALRRHMSG DIDNFPRDVA ELVDWFDARD PNPHVRPVPG YGEKIPVWLL GSSLYSAQLA
AQLGLPFAFA SHFAPDMLFQ ALHLYRSNFK PSARLEKPYA MVCINIIAAD SNRDAEFLFT
SMQQAFVKLR RGETGQLPPP IQNMDQFWSP SEQYGVQQAL SMSLVGDKAK VRHGLQSILR
ETDADEIMVN GQIFDHQARL HSFELVMDVK EELLG
|
|---|
| |