Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3455 |
Symbol | |
ID | 6143206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3529244 |
End bp | 3530122 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641618284 |
Product | U32 family peptidase |
Protein accession | YP_001745433 |
Protein GI | 170684049 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATT CCTTAGGGCC AGTGCTGTGG TACTGGCCAA AAGAGACGCT GGAAGAATTT TATCAGCAGG CCGCCGCCAG CAGCGCCGAC GTGATTTATC TTGGTGAAGC GGTCTGTAGC AAACGCCGGG CAACCAAAGT TGGCGACTGG CTGGAGATGG CAAAATCGCT CGCCGGAAGT GGCAAGCAGA TTGTGCTCTC CACGCTGGCA CTGGTGCAGG CATCCTCCGA ACTGGGCGAA CTGAAACGCT ATGTTGAGAA CGGTGAGTTT CTGATTGAAG CCAGCGATCT CGGCGTGGTG AATATGTGCG CTGAACGCAA ACTGCCGTTC GTCGCCGGGC ACGCGCTGAA CTGCTACAAC GCGGTGACGC TGAAAATATT GCTCAAACAG GGCATGATGC GCTGGTGTAT GCCGGTGGAG CTTTCCCGCG ACTGGTTGGT GAATCTGCTT AATCAGTGCG ATGAGCTGGG CATTCGCAAC CAGTTTGAAG TGGAAGTCCT GAGCTACGGT CATCTGCCGC TGGCCTACTC CGCCCGCTGC TTTACCGCGC GTTCGGAAGA CCGCCCGAAA GATGAGTGTG AAACCTGCTG CATTAAGTAT CCGAACGGGC GCAACGTGCT ATCGCAGGAA AACCAACAAG TGTTTGTACT CAATGGCATT CAGACCATGA GCGGCTACGT TTACAACCTC GGTAACGAGC TGACATCCAT GCAGGGGCTG GTCGATGTGG TCCGCCTGTC ACCGCAGGGT ACTGACACTT TCGCAATGCT CGACGCCTTC CGCGCCAATG AAAATGGCGC TGCACCACTG CCGTTGACGG CAAACAGCGA TTGTAACGGC TACTGGCGGC GGCTGGCCGG GCTGGAGCTG CAAGCGTAA
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Protein sequence | MKYSLGPVLW YWPKETLEEF YQQAAASSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAGS GKQIVLSTLA LVQASSELGE LKRYVENGEF LIEASDLGVV NMCAERKLPF VAGHALNCYN AVTLKILLKQ GMMRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC FTARSEDRPK DECETCCIKY PNGRNVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL VDVVRLSPQG TDTFAMLDAF RANENGAAPL PLTANSDCNG YWRRLAGLEL QA
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