Gene EcSMS35_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3455 
Symbol 
ID6143206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3529244 
End bp3530122 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID641618284 
ProductU32 family peptidase 
Protein accessionYP_001745433 
Protein GI170684049 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT CCTTAGGGCC AGTGCTGTGG TACTGGCCAA AAGAGACGCT GGAAGAATTT 
TATCAGCAGG CCGCCGCCAG CAGCGCCGAC GTGATTTATC TTGGTGAAGC GGTCTGTAGC
AAACGCCGGG CAACCAAAGT TGGCGACTGG CTGGAGATGG CAAAATCGCT CGCCGGAAGT
GGCAAGCAGA TTGTGCTCTC CACGCTGGCA CTGGTGCAGG CATCCTCCGA ACTGGGCGAA
CTGAAACGCT ATGTTGAGAA CGGTGAGTTT CTGATTGAAG CCAGCGATCT CGGCGTGGTG
AATATGTGCG CTGAACGCAA ACTGCCGTTC GTCGCCGGGC ACGCGCTGAA CTGCTACAAC
GCGGTGACGC TGAAAATATT GCTCAAACAG GGCATGATGC GCTGGTGTAT GCCGGTGGAG
CTTTCCCGCG ACTGGTTGGT GAATCTGCTT AATCAGTGCG ATGAGCTGGG CATTCGCAAC
CAGTTTGAAG TGGAAGTCCT GAGCTACGGT CATCTGCCGC TGGCCTACTC CGCCCGCTGC
TTTACCGCGC GTTCGGAAGA CCGCCCGAAA GATGAGTGTG AAACCTGCTG CATTAAGTAT
CCGAACGGGC GCAACGTGCT ATCGCAGGAA AACCAACAAG TGTTTGTACT CAATGGCATT
CAGACCATGA GCGGCTACGT TTACAACCTC GGTAACGAGC TGACATCCAT GCAGGGGCTG
GTCGATGTGG TCCGCCTGTC ACCGCAGGGT ACTGACACTT TCGCAATGCT CGACGCCTTC
CGCGCCAATG AAAATGGCGC TGCACCACTG CCGTTGACGG CAAACAGCGA TTGTAACGGC
TACTGGCGGC GGCTGGCCGG GCTGGAGCTG CAAGCGTAA
 
Protein sequence
MKYSLGPVLW YWPKETLEEF YQQAAASSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAGS 
GKQIVLSTLA LVQASSELGE LKRYVENGEF LIEASDLGVV NMCAERKLPF VAGHALNCYN
AVTLKILLKQ GMMRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC
FTARSEDRPK DECETCCIKY PNGRNVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL
VDVVRLSPQG TDTFAMLDAF RANENGAAPL PLTANSDCNG YWRRLAGLEL QA