| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3454 |
|---|
| Symbol | |
|---|
| ID | 6145982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3528240 |
|---|
| End bp | 3529235 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641618283 |
|---|
| Product | U32 family peptidase |
|---|
| Protein accession | YP_001745432 |
|---|
| Protein GI | 170683910 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC TCTGCCCTGC CGGAAATCTC CCGGCGCTTA AGGCGGCCAT CGAAAACGGC
GCAGATGCTG TTTATATCGG GCTAAAAGAT GATACCAATG CCCGTCACTT CGCCGGCCTT
AACTTTACCG AGAAAAAATT GCAGGAAGCG GTGAGTTTTG TCCATCAACA TCGCCGCAAA
CTTCACATCG CGATTAACAC TTTTGCGCAT CCGGACGGTT ACGCCCGCTG GCAGCGCGCC
GTGGATATGG CGGCGCAGCT GGGTGCCGAC GCGCTGATCC TCGCCGACCT CGCCATGCTG
GAGTACGCCG CCGAGCGTTA CCCGCATATT GAGCGTCATG TGTCAGTGCA GGCTTCGGCG
ACCAATGAAG AGGCGATTAA CTTTTATCAT CGCCATTTTG ACGTTGCCCG CGTGGTGCTG
CCGCGCGTGT TGTCGATTCA TCAGGTGAAA CAACTGGCAC GGGTCACACC TGTACCACTG
GAAGTCTTTG CTTTCGGCAG CCTGTGCATT ATGTCGGAAG GTCGTTGCTA TCTGTCGTCG
TATCTGACGG GTGAGTCGCC CAACACTGTG GGTGCGTGTT CTCCGGCCCG TTTCGTGCGC
TGGCAACAAA CGCCGCAGGG GCTGGAATCC CGCCTGAACG AAGTGCTGAT CGACCGTTAT
CAGGACGGCG AAAACGCAGG TTATCCGACG CTGTGTAAAG GGCGTTATCT GGTGGACGGC
GAGCGCTATC ACGCGCTGGA AGAACCCACC AGTCTCAATA CCCTGGAACT GCTGCCGGAG
TTAATGGCAG CGAATATTGC TTCGGTGAAA ATTGAAGGCC GCCAGCGTAG CCCGGCGTAT
GTCAGCCAGG TGGCGAAAGT CTGGCGTCAG GCTATCGACC GTTGTAAGGC CGATCCGCAA
AACTTCATAC CGCAAAGCGC GTGGATGGAG ACGCTCGGGT CGATGTCCGA AGGCACGCAG
ACCACCCTTG GCGCGTATCA CCGTAAATGG CAGTGA
|
|---|
| Protein sequence | MELLCPAGNL PALKAAIENG ADAVYIGLKD DTNARHFAGL NFTEKKLQEA VSFVHQHRRK
LHIAINTFAH PDGYARWQRA VDMAAQLGAD ALILADLAML EYAAERYPHI ERHVSVQASA
TNEEAINFYH RHFDVARVVL PRVLSIHQVK QLARVTPVPL EVFAFGSLCI MSEGRCYLSS
YLTGESPNTV GACSPARFVR WQQTPQGLES RLNEVLIDRY QDGENAGYPT LCKGRYLVDG
ERYHALEEPT SLNTLELLPE LMAANIASVK IEGRQRSPAY VSQVAKVWRQ AIDRCKADPQ
NFIPQSAWME TLGSMSEGTQ TTLGAYHRKW Q
|
|---|
| |