Gene EcSMS35_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3452 
Symbol 
ID6146860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3527507 
End bp3528031 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID641618281 
Productsterol-binding protein 
Protein accessionYP_001745430 
Protein GI170680098 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGATA AACTGCGTTC CCGTATTGTG CATTTGGGGC CATCTCTGTT GAGTGTACCG 
GTAAAACTGA CGCCATTTGC GCTAAAACGC CAGGTTCTTG AGCAGGTCTT AAGCTGGCAA
TTCCGCCAGG CGTTGGATGA TGGCGAGCTG GAGTTTCTTG AAGGCCGCTG GTTAAGTATT
CATGTGCGTG ATATTGACCT GCAATGGTTT ACCTCGGTGG TGAATGGCAA ACTGGTCGTT
AGCCAGAACG CGCAAGCTGA TGTGAGTTTT AGTGCCGACG CCAGCGATCT GCTGATGATT
GCGGCGCGTA AACAAGATCC GGATACGCTC TTCTTCCAAC GTCGGCTGGT GATTGAAGGC
GATACGGAGC TGGGGTTATA TGTGAAAAAC CTGATGGACG CCATTGAACT GGAGCAAATG
CCGAAAGCCT TACGCATGAT GCTGCTGCAA CTGGCGGATT TTGTTGAGGC GGGAATGAAA
ACCGCGCCTG AAACCAAACA GACATCGGTA GGTGAACCAT GCTAA
 
Protein sequence
MLDKLRSRIV HLGPSLLSVP VKLTPFALKR QVLEQVLSWQ FRQALDDGEL EFLEGRWLSI 
HVRDIDLQWF TSVVNGKLVV SQNAQADVSF SADASDLLMI AARKQDPDTL FFQRRLVIEG
DTELGLYVKN LMDAIELEQM PKALRMMLLQ LADFVEAGMK TAPETKQTSV GEPC