| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3446 |
|---|
| Symbol | |
|---|
| ID | 6144676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3523853 |
|---|
| End bp | 3524893 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641618275 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001745424 |
|---|
| Protein GI | 170683334 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTC AGTCTTCATC TCAGGCGGCA ACGCCCATTC AGTGGTGGAA ACCCGCGCTT
TTCTTTCTCG TTGTCATTGC TGGTCTCTGG TATGTGAAAT GGCAACCTTA CTACGGCAAA
GCGTTTACTG CTGCCGAAAC CCACAGTATC GGTAAATCTA TCCTTGCGCA GGCGGATGCT
AATCCGTGGC AGGCGGCGTT GGATTACGCG ATGATCTATT TCCTCGCGGT ATGGAAAGCG
GCGGTGCTGG GCGTACTGCT CGGGTCGTTG ATTCAGGTGC TGATCCCGCG TGACTGGTTA
TTGCGTACGC TTGGGCAATC GCGCTTTCGC GGCACGCTGC TGGGAACGCT GTTTTCGCTG
CCGGGCATGA TGTGTACCTG CTGTGCGGCT CCGGTCGCGG CGGGAATGCG TCGCCAACAG
GTGTCGATGG GCGGTGCGCT GGCATTCTGG ATGGGGAATC CGTTGTTAAA CCCGGCGACG
CTGGTGTTTA TGGGGTTCGT CCTCGGCTGG GGTTTTGCGG CGATTCGTCT GGTGGCGGGG
CTGGTGATGG TGTTGCTGAT TGCGACGCTG GTGCAAAAAT GGGTGCGTGA AACACCGCAA
ACGCAGGCAC CGGTCGAAAT TGACATACCG GAAGCACAGG GAGGATTTTT TAGCCGCTGG
GGCAGGGCGC TATGGACGCT TTTCTGGAGT ACAATCCCGG TTTACATCCT TGCAGTACTG
GTGTTGGGTG CCGCTCGCGT CTGGCTATTC CCCCATGCCG ATGGTGCTGT CGATAACAGC
CTGATGTGGG TGGTGGCGAT GGCGGTGGCA GGATGCTTGT TTGTCATTCC CACGGCAGCA
GAAATTCCGA TTGTACAAAC GATGATACTG GCAGGCATGG GAACCGCTCC GGCGCTGGCA
TTGTTGATGA CGCTCCCGGC GGTGAGTTTG CCGTCACTGA TTATGTTGCG TAAAGCGTTC
CCGGCGAAAG CCTTATGGCT GACGGGGGCG ATGGTGGCAG TGTCTGGTGT GATTGTCGGC
GGGTTGGCGC TGTTGGCTTG A
|
|---|
| Protein sequence | MTGQSSSQAA TPIQWWKPAL FFLVVIAGLW YVKWQPYYGK AFTAAETHSI GKSILAQADA
NPWQAALDYA MIYFLAVWKA AVLGVLLGSL IQVLIPRDWL LRTLGQSRFR GTLLGTLFSL
PGMMCTCCAA PVAAGMRRQQ VSMGGALAFW MGNPLLNPAT LVFMGFVLGW GFAAIRLVAG
LVMVLLIATL VQKWVRETPQ TQAPVEIDIP EAQGGFFSRW GRALWTLFWS TIPVYILAVL
VLGAARVWLF PHADGAVDNS LMWVVAMAVA GCLFVIPTAA EIPIVQTMIL AGMGTAPALA
LLMTLPAVSL PSLIMLRKAF PAKALWLTGA MVAVSGVIVG GLALLA
|
|---|
| |