Gene EcSMS35_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3445 
Symbol 
ID6146324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3523165 
End bp3523740 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID641618274 
Producthypothetical protein 
Protein accessionYP_001745423 
Protein GI170680506 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT TATCGCCAAT CGCAGTCCTT CTTTCCGCGC TGCTGTTGCA AGGTTGTGTT 
GCCGCTGCCG TAGTGGGTAC CGCTGCTGTA GGTACCAAAG CCGCAACTGA CCCACGCAGT
GTCGGCACCC AGGTGGACGA TGGTACCCTG GAAGTGCGCG TGAACAGCGC ATTGTCGAAA
GACGAACAGA TTAAGAAAGA AACCCGTATT AATGTCACGG CGTATCAGGG CAAAGTGCTG
TTGGTTGGGC AGTCACCAAA CGCTGAACTT TCGGCTCGCG CTAAACAAAT TGCGATGGGC
GTAGACGGTG CCAACGAAGT GTATAACGAG ATTCGTCAGG GCCAGCCGAT TGGTCTGGGC
GAAGCGTCTA ACGATACGTG GATCACCACC AAAGTGCGTT CGCAGCTGTT AACCAGCGAC
CTGGTGAAAT CGTCCAACGT GAAAGTGACC ACCGAAAACG GTGAAGTGTT CCTGATGGGG
CTGGTGACTG AACGTGAAGC GAAAGCGGCG GCAGATATTG CCAGCCGGGT GAGCGGCGTA
AAGCGTGTAA CTACGGCGTT TACGTTTATT AAATAG
 
Protein sequence
MKALSPIAVL LSALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL EVRVNSALSK 
DEQIKKETRI NVTAYQGKVL LVGQSPNAEL SARAKQIAMG VDGANEVYNE IRQGQPIGLG
EASNDTWITT KVRSQLLTSD LVKSSNVKVT TENGEVFLMG LVTEREAKAA ADIASRVSGV
KRVTTAFTFI K