| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3433 |
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| Symbol | agaF |
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| ID | 6142773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3512202 |
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| End bp | 3512636 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618262 |
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| Product | PTS system, mannose/sorbose-specific, IIA component |
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| Protein accession | YP_001745411 |
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| Protein GI | 170684074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
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| TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGTA TTATTTTGAC AGGGCATGGC GGATTTGCCA GCGGCATGGA AAAAGCAATG
AAGCAAATTC TCGGTGAGCA ATCGCAGTTT ATCGCCATCG ATTTTCCGGA AACCTCAAGC
ACCGCGCTGC TTACATCGCA GCTTGAAGAG GCCATCGTCC AACTGGATTG TGAAGACGGC
ATTGTTTTTC TGACGGATTT GCTGGGCGGC ACGCCGTTTC GCGTAGCTTC AACGCTGGCG
ATGCAAAAAC CGGGCTGTGA AGTGATCACC GGCACAAATT TGCAACTATT ACTGGAAATG
GTGCTGGAAC GCGAAGGGTT AAGCGGTGAA GAGTTCCGTG TGCAGGCGCT GGAGTGTGGA
CACCGTGGGC TAACCAGTCT GGTGGACGAA CTTGGTCGCT GCCATGAGGA ATGTCCGGTC
GAGGAAGGAA TATGA
|
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| Protein sequence | MLSIILTGHG GFASGMEKAM KQILGEQSQF IAIDFPETSS TALLTSQLEE AIVQLDCEDG
IVFLTDLLGG TPFRVASTLA MQKPGCEVIT GTNLQLLLEM VLEREGLSGE EFRVQALECG
HRGLTSLVDE LGRCHEECPV EEGI
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