| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3432 |
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| Symbol | agaE |
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| ID | 6143544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3511306 |
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| End bp | 3512184 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618261 |
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| Product | PTS system N-acetylgalactosamine-specific, IID component |
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| Protein accession | YP_001745410 |
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| Protein GI | 170683484 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTA ATCAAACTAC CCTGCCGAAC GTCAGTGAAA ACGAAGAAAC ACTGCTGACA
GGTGTCAATG AAAACGTGTA TGAAGATCAG AGCATTGGCG CAGAGCTGAC GAAAAAAGAT
ATCAACCGCG TCGCCTGGCG TTCCATGCTG TTACAAGCGT CTTTTAACTA CGAACGTATG
CAGGCTTCTG GCTGGTTGTA CGGTCTGCTG CCTGCTCTGA AAAAGATCCA CACTAATAAA
CGCGACCTGG CGCGCGCCAT GAAGGGGCAT ATGGGTTTCT TCAATACCCA TCCGTTTCTG
GTGACGTTTG TTATCGGCAT TATCCTTGCG ATGGAGCGTT CTAAGCAGGA CGTTAACAGT
ATTCAGAGCA CCAAAATTGC CGTCGGTGCG CCGCTCGGCG GGATTGGCGA TGCGATGTTC
TGGCTAACGC TACTGCCGAT TTGTGGCGGG ATAGGTGCAA GCCTCGCGCT ACAAGGCTCT
ATTCTTGGCG CTGTCGTCTT TATTGTGCTG TTCAACGTGG TGCACCTGGG GCTGCGTTTT
GGTCTGGCGC ATTATGCTTA CCGCATGGGC GTGGCGGCGA TTCCACTCAT TAAAGCAAAT
ACCAAAAAAG TCGGCCATGC GGCATCTATC GTTGGGATGA CGGTAATCGG CGCGCTGGTG
GCAACCTATG TTCGTTTAAG CACCACGCTG GAAATCACCG CGGGCGACGC AGTGGTTAAG
TTACAGGCTG ATGTTATCGA CAAACTGATG CCAGCCTTCT TACCGCTGGT CTACACCCTG
ACCATGTTCT GGCTGGTACG CCGCGGCTGG AGTCCGCTGC GCCTGATTGC GGTTACCGTG
GTTCTCGGCA TCGTCGGTAA ATTCTGCCAT TTCCTTTAA
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| Protein sequence | MASNQTTLPN VSENEETLLT GVNENVYEDQ SIGAELTKKD INRVAWRSML LQASFNYERM
QASGWLYGLL PALKKIHTNK RDLARAMKGH MGFFNTHPFL VTFVIGIILA MERSKQDVNS
IQSTKIAVGA PLGGIGDAMF WLTLLPICGG IGASLALQGS ILGAVVFIVL FNVVHLGLRF
GLAHYAYRMG VAAIPLIKAN TKKVGHAASI VGMTVIGALV ATYVRLSTTL EITAGDAVVK
LQADVIDKLM PAFLPLVYTL TMFWLVRRGW SPLRLIAVTV VLGIVGKFCH FL
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