| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3431 |
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| Symbol | agaW |
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| ID | 6142876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3510537 |
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| End bp | 3511316 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618260 |
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| Product | PTS system, N-acetylgalactosamine-specific, IIC component |
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| Protein accession | YP_001745409 |
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| Protein GI | 170684243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA GTCTGTTGCA GGCATTCGCG TTGGGCATTA TCGCCTTTAT CGCTGGCCTG
GATATGTTTA ACGGCCTAAC CCATATGCAC CGCCCGGTGG TCCTCGGCCC GTTGGTCGGA
CTGGTACTTG GCGATCTGCA TACCGGTATT TTAACCGGCG GTACGCTGGA ACTGGTGTGG
ATGGGGCTGG CCCCGCTGGC AGGCGCACAA CCGCCTAACG TGATTATCGG TACTATCGTC
GGCACGGCGT TTGCCATTAC TACTGGCGTG AAACCGGATG TCGCGGTCGG TGTCGCCGTA
CCTTTCGCTG TCGCAGTACA GATGGGGATT ACCTTCCTGT TCTCGGTGAT GTCCGGCGTG
ATGTCCCGCT GCGACCGGAT GGCGGAGAAC GCCGATACTC GCGGCATTGA ACGCGTGAAC
TATCTGGCAT TGCTGGCACT CGGCACGTTC TATTTTCTCT GCGCTTTCCT GCCTATCTAC
TTCGGCGCAG AACATGCCAA AACCATCATT GATGTCCTGC CGCAACGATT AATCGACGGC
CTCGGCGTCG CGGGTGGCAT CATGCCAGCA ATCGGTTTTG CCGTGCTGCT GAAAATCATG
ATGAAAAACG TCTACATCCC CTACTTCATC CTGGGCTTTG TTGCCGCAGC CTGGCTCAAG
TTACCGGTGC TGGCTATTGC TGCCGCCGCG CTGGCGATGG CGCTGATCGA CTTGCTGCGT
AAATCTCCTG AACCGACTCA ACCTGCGGCA CAGAAAGAGG AATTTGAAGA TGGCATCTAA
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| Protein sequence | MEISLLQAFA LGIIAFIAGL DMFNGLTHMH RPVVLGPLVG LVLGDLHTGI LTGGTLELVW
MGLAPLAGAQ PPNVIIGTIV GTAFAITTGV KPDVAVGVAV PFAVAVQMGI TFLFSVMSGV
MSRCDRMAEN ADTRGIERVN YLALLALGTF YFLCAFLPIY FGAEHAKTII DVLPQRLIDG
LGVAGGIMPA IGFAVLLKIM MKNVYIPYFI LGFVAAAWLK LPVLAIAAAA LAMALIDLLR
KSPEPTQPAA QKEEFEDGI
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