| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3422 |
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| Symbol | garP |
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| ID | 6146497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3503409 |
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| End bp | 3504743 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641618251 |
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| Product | galactarate permease GarP |
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| Protein accession | YP_001745400 |
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| Protein GI | 170683081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGG ACACCGTTGA CGTAAAAAAG AAAGGCGTGC ATACCCGCTA TTTAATATTA
CTGATTATTT TTATTGTTAC CGCCGTTAAC TACGCCGATC GTGCAACGCT GTCTATTGCT
GGTACCGAAG TGGCAAAAGA GTTGCAGTTA AGTGCGGTTT CGATGGGTTA CATCTTCTCC
GCTTTTGGCT GGGCCTACCT GCTGATGCAA ATTCCCGGCG GCTGGCTGCT TGATAAGTTT
GGCTCGAAAA AAGTTTACAC CTACAGCCTC TTTTTCTGGT CGCTGTTCAC CTTCCTGCAA
GGCTTTGTTG ATATGTTCCC GCTGGCCTGG GCAGGGATCT CCATGTTCTT TATGCGCTTT
ATGCTGGGGT TCTCGGAAGC GCCATCATTC CCGGCGAACG CCCGTATTGT CGCCGCCTGG
TTCCCAACGA AAGAACGTGG TACTGCCTCC GCCATCTTTA ACTCGGCGCA ATATTTCTCG
CTGGCGCTCT TTTCGCCGCT GCTTGGCTGG CTGACTTTCG CCTGGGGCTG GGAGCACGTC
TTCACCGTTA TGGGGGTGAT TGGTTTTGTG CTGACGGCGC TGTGGATCAA GTTGATTCAT
AACCCGACAG ATCACCCACG TATGTCTGCG GAAGAGCTGA AGTTTATCTC AGAAAATGGC
GCGGTGGTCG ATATGGACCA CAAAAAGCCG GGCAGTGCGG CAGCAAGCGG TCCCAAACTG
CATTACATCA AGCAATTGCT CTCTAACCGC ATGATGCTGG GCGTATTTTT CGGACAATAT
TTTATCAACA CCATCACCTG GTTCTTCCTC ACCTGGTTCC CAATTTATCT GGTGCAGGAA
AAAGGCATGT CGATTCTGAA AGTGGGTCTG GTCGCCTCGA TTCCGGCACT GTGTGGCTTT
GCGGGCGGCG TACTGGGAGG TGTCTTCTCG GATTATCTGA TCAAACGCGG TTTGTCCCTG
ACCCTGGCAC GTAAGCTACC GATTGTGCTG GGAATGTTGC TGGCTTCCAC CATTATCTTA
TGTAACTACA CCAACAACAC CACGCTAGTG GTCATGCTGA TGGCGCTGGC TTTCTTTGGC
AAAGGATTTG GTGCGCTGGG CTGGCCGGTA ATTTCTGACA CCGCGCCGAA AGAGATTGTT
GGTCTCTGCG GCGGCGTCTT TAACGTCTTT GGCAATGTTG CCTCCATTGT CACTCCACTG
GTGATTGGCT ACCTGGTAAG TGAATTGCAC TCCTTCAATG CAGCACTGGT TTTCGTGGGA
TGTTCAGCGC TGATGGCGAT GGTCTGCTAC CTCTTCGTAG TTGGCGACAT TAAACGTATG
GAATTGCAGA AATAA
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| Protein sequence | MILDTVDVKK KGVHTRYLIL LIIFIVTAVN YADRATLSIA GTEVAKELQL SAVSMGYIFS
AFGWAYLLMQ IPGGWLLDKF GSKKVYTYSL FFWSLFTFLQ GFVDMFPLAW AGISMFFMRF
MLGFSEAPSF PANARIVAAW FPTKERGTAS AIFNSAQYFS LALFSPLLGW LTFAWGWEHV
FTVMGVIGFV LTALWIKLIH NPTDHPRMSA EELKFISENG AVVDMDHKKP GSAAASGPKL
HYIKQLLSNR MMLGVFFGQY FINTITWFFL TWFPIYLVQE KGMSILKVGL VASIPALCGF
AGGVLGGVFS DYLIKRGLSL TLARKLPIVL GMLLASTIIL CNYTNNTTLV VMLMALAFFG
KGFGALGWPV ISDTAPKEIV GLCGGVFNVF GNVASIVTPL VIGYLVSELH SFNAALVFVG
CSALMAMVCY LFVVGDIKRM ELQK
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