Gene EcSMS35_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3421 
SymbolgarL 
ID6147417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3502623 
End bp3503393 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content53% 
IMG OID641618250 
Productalpha-dehydro-beta-deoxy-D-glucarate aldolase 
Protein accessionYP_001745399 
Protein GI170682298 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR03239] 2-dehydro-3-deoxyglucarate aldolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG ATGTTTTCCC GAATAAATTC AAAGCCGCAC TGGCTGCGAA ACAGGTACAA 
ATTGGTTGCT GGTCAGCACT CTCTAACCCG ATTAGCACTG AAGTCCTTGG TTTGGCTGGG
TTTGACTGGC TGGTGCTGGA TGGCGAACAT GCGCCAAACG ATATCTCCAC GTTTATTCCG
CAGTTAATGG CCCTGAAAGG CAGCGCCAGC GCGCCAGTAG TGCGAGTGCC GACCAACGAG
CCGGTAATTA TTAAGCGTCT TCTGGATATC GGTTTCTATA ACTTCCTGAT TCCTTTTGTA
GAAACAAAAG AGGAAGCAGA GCAGGCGGTG GCATCAACCC GTTACCCACC GGAAGGCATT
CGCGGCGTCT CCGTTTCTCA CCGCGCCAAT ATGTTTGGCA CCGTGGCGGA TTATTTCGCT
CAGTCGAACA AGAACATCAC CATTCTGGTC CAGATAGAAA GTCAGCAGGG CGTAGATAAC
GTCGATGCCA TTGCCGCTAC CGAAGGCGTA GACGGTATCT TCGTCGGCCC CAGCGATCTG
GCTGCGGCAT TAGGCCATCT CGGCAATGCC TCGCACCCGG ATGTACAAAA AGCAATCCAG
CATATTTTTA ACCGTGCCAG TGCGCACGGC AAACCCAGCG GTATCCTCGC ACCGGTCGAA
GCCGATGCGC GTCGTTATCT GGAATGGGGG GCGACGTTTG TGGCTGTCGG CAGCGATCTC
GGCGTCTTCC GCTCTGCCAC TCAGAAACTG GCTGATACCT TTAAAAAATA A
 
Protein sequence
MNNDVFPNKF KAALAAKQVQ IGCWSALSNP ISTEVLGLAG FDWLVLDGEH APNDISTFIP 
QLMALKGSAS APVVRVPTNE PVIIKRLLDI GFYNFLIPFV ETKEEAEQAV ASTRYPPEGI
RGVSVSHRAN MFGTVADYFA QSNKNITILV QIESQQGVDN VDAIAATEGV DGIFVGPSDL
AAALGHLGNA SHPDVQKAIQ HIFNRASAHG KPSGILAPVE ADARRYLEWG ATFVAVGSDL
GVFRSATQKL ADTFKK