Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3408 |
Symbol | tdcG |
ID | 6144161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3488513 |
End bp | 3489883 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618237 |
Product | L-serine ammonia-lyase TdcG |
Protein accession | YP_001745386 |
Protein GI | 170680456 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATGA TTAGTGCATT CGATATTTTC AAAATTGGGA TTGGTCCCTC CAGTTCGCAT ACCGTGGGGC CAATGAATGC CGGAAAAAGT TTTATTGATC GGCTGGAAAG TAGCGGCTTA TTAACCGCGA CGAGCCATAT TGTGGTCGAT CTGTACGGGT CGTTGTCACT GACGGGCAAA GGCCATGCCA CGGATGTCGC CATCATCATG GGACTGGCAG GAAACAGTCC GCAGGATGTT GTCATTGATG AGATCCCTGC ATTTATAGAG TTAGTGACGC GCAGCGGGCG GCTGCCAGTG GCATCTGGTG CGCATATTGT TGATTTTCCT GTAGCAAAGA ACATTATCTT CCATCCCGAA ATGTTGCCTC GCCATGAGAA CGGAATGCGG ATCACTGCCT GGAAGGGACA GGAAGCGCTA TTAAGCAAAA CCTATTACTC TGTCGGCGGC GGGTTTATTG TCGAAGAAGA ACACTTCGGC CTGTCGCACG ATGTCGAAAC GTCCGTACCT TACGATTTCC ACTCAGCAGG AGAACTGCTG AAAATGTGTG ATTACAACGG CCTGTCTATT TCTGGCCTGA TGATGCACAA CGAGCTGGCG CTGCGCAGTA AAGCGGAAAT TGATGCCGGT TTTGCCCGTA TCTGGCAAGT GATGCATGAC GGTATTGAAC GCGGGATGAA CACTGAAGGC GTGCTGCCTG GTCCGCTCAA TGTGCCGCGC CGTGCCGTAG CGCTGCGTCG TCAGTTGGTT TCCAGCGATA ACATCTCTAA CGATCCGATG AATGTCATCG ACTGGATCAA CATGTACGCG CTGGCGGTTA GTGAAGAAAA CGCAGCTGGC GGGCGCGTGG TAACGGCACC GACTAACGGT GCGTGCGGCA TTATTCCGGC AGTGCTGGCT TATTACGATA AGTTCCGTCG TCCGGTAAAT GAGCGGTCAA TTGCCCGCTA TTTTCTTGCA GCCGGGGCTA TTGGCGCGCT GTATAAAATG AACGCCTCCA TCTCTGGCGC GGAAGTCGGC TGTCAGGGGG AGATTGGCGT GGCCTGTTCA ATGGCGGCGG CAGGGTTAAC TGAACTACTG GGCGGCAGTC CGGCGCAGGT ATGCAATGCG GCGGAAATCG CGATGGAGCA TAACCTTGGG CTGACCTGCG ATCCGGTTGC CGGACAGGTA CAAATCCCGT GCATTGAACG TAATGCCATT AATGCCGTGA AAGCAGTAAA CGCCGCGCGG ATGGCGATGC GCCGCACCTC GGCACCGCGT GTTTCACTCG ATAAAGTGAT CGAGACGATG TATGAAACCG GCAAAGATAT GAACGATAAA TACCGCGAAA CATCACGCGG AGGACTGGCT ATTAAAGTGG TCTGCGGCTG A
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Protein sequence | MDMISAFDIF KIGIGPSSSH TVGPMNAGKS FIDRLESSGL LTATSHIVVD LYGSLSLTGK GHATDVAIIM GLAGNSPQDV VIDEIPAFIE LVTRSGRLPV ASGAHIVDFP VAKNIIFHPE MLPRHENGMR ITAWKGQEAL LSKTYYSVGG GFIVEEEHFG LSHDVETSVP YDFHSAGELL KMCDYNGLSI SGLMMHNELA LRSKAEIDAG FARIWQVMHD GIERGMNTEG VLPGPLNVPR RAVALRRQLV SSDNISNDPM NVIDWINMYA LAVSEENAAG GRVVTAPTNG ACGIIPAVLA YYDKFRRPVN ERSIARYFLA AGAIGALYKM NASISGAEVG CQGEIGVACS MAAAGLTELL GGSPAQVCNA AEIAMEHNLG LTCDPVAGQV QIPCIERNAI NAVKAVNAAR MAMRRTSAPR VSLDKVIETM YETGKDMNDK YRETSRGGLA IKVVCG
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