| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3393 |
|---|
| Symbol | |
|---|
| ID | 6145188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3477835 |
|---|
| End bp | 3478497 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641618222 |
|---|
| Product | putative inner membrane protein |
|---|
| Protein accession | YP_001745371 |
|---|
| Protein GI | 170684106 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTT TGACCCAATT GCTGCAAGCC CTGTGGGCGC AGGATTTTGA AACCCTGGCC
AATCCGTCGA TGATTGGCAT GTTGTATTTT GTCTTGTTTG TCATTTTGTT CCTTGAAAAC
GGCTTGCTTC CGGCGGCCTT TTTACCGGGC GACAGTTTAC TGGTACTGGT CGGCGTATTG
ATTGCGAAAG GCGCGATGGG CTATCCGCAA ACGATTCTGC TGCTGACCGT TGCCGCCAGC
CTCGGCTGCT GGGTCAGCTA TATTCAGGGG CGATGGCTGG GCAATACCCG CACCGTACAA
AACTGGCTAT CTCATTTACC CGCGCATTAT CATCAACGCG CACACCATCT TTTTCATAAA
CACGGTTTAT CGGCGCTGTT AATTGGTCGC TTTATTGCGT TTGTCAGAAC ACTGCTGCCG
ACGATTGCCG GGTTATCAGG GCTGAATAAC GCGCGCTTTC AGTTCTTCAA CTGGATGAGT
GGTCTGCTGT GGGTATTGAT CCTGACAACT CTGGGTTACA TGCTCGGCAA AACGCCGGTA
TTTTTAAAGT ACGAGGACCA GCTGATGTCA TGCCTGATGC TGCTCCCGGT GGTGCTGCTG
GTGTTTGGCC TGGCAGGTTC TCTGGTTGTG TTATGGAAAA AGAAATATGG AAATCGGGGG
TAA
|
|---|
| Protein sequence | MELLTQLLQA LWAQDFETLA NPSMIGMLYF VLFVILFLEN GLLPAAFLPG DSLLVLVGVL
IAKGAMGYPQ TILLLTVAAS LGCWVSYIQG RWLGNTRTVQ NWLSHLPAHY HQRAHHLFHK
HGLSALLIGR FIAFVRTLLP TIAGLSGLNN ARFQFFNWMS GLLWVLILTT LGYMLGKTPV
FLKYEDQLMS CLMLLPVVLL VFGLAGSLVV LWKKKYGNRG
|
|---|
| |