Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3384 |
Symbol | uxaC |
ID | 6146085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3468043 |
End bp | 3469455 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618213 |
Product | glucuronate isomerase |
Protein accession | YP_001745362 |
Protein GI | 170683343 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1904] Glucuronate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.666142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCCGT TTATGACTGA AGATTTCCTG TTAGATACCG AATTTGCCCG CCGTCTGTAT CACGACTACG CAAAAGACCA GCCGATTTTC GATTACCATT GCCATTTGCC GCCGCAGCAG ATTGCGGAAG ACTATCGTTT TAAAAACCTG TATGACATCT GGTTGAAGGG CGATCACTAC AAATGGCGCG CTATGCGTAC CAACGGTGTG GCCGAGCGTC TGTGCACCGG TGATGCGTCT GACCGTGAAA AATTTGACGC CTGGGCGGCG ACTGTTCCGC ATACTATCGG CAACCCGTTA TACCACTGGA CGCACCTCGA ACTGCGTCGT CCGTTTGGTA TCACTGGCAA ATTGCTTTCT CCGTCAACTG CCGATGAAAT CTGGAACGAA TGTAACGAAT TGCTGGCGCA GGATAATTTC TCTGCACGCG GCATCATGCA GCAGATGAAC GTGAAAATGG TCGGCACCAC CGATGACCCG ATCGATTCTC TGGAGCATCA CGCAGAGATC GCCAAAGATG GCTCTTTCAC CATTAAAGTG CTGCCGAGCT GGCGTCCGGA CAAAGCCTTT AACATTGAAC AGGCGACCTT TAACGACTAC ATGGCGAAGC TGGGCGAAGT TTCCGATACC GACATTCGCC GCTTTGCTGA CCTGCAAACA GCCCTGACTA AACGTCTGGA TCACTTCGCC GCTCACGGCT GTAAAGTGTC TGACCACGCG CTGGATGTAG TGATGTTTGC TGAAGCGAAC GAAGCGGAAC TGGACAGCAT CCTCGCGCGC CGTCTGGCAG GCGAAACCCT GAGCGAGCAC GAAGTGGCAC AGTTCAAAAC TGCGGTGCTG GTGTTCCTCG GCGCTGAATA CGCACGTCGC GGCTGGGTAC AGCAGTACCA TATTGGCGCA CTGCGTAATA ACAACCTGCG TCAGTTTAAA CTGCTGGGGC CGGATGTCGG CTTTGACTCC ATCAACGACC GTCCGATGGC GGAAGAGCTG TCTAAGCTGC TGAGCAAGCA GAACGAAGAA AACCTGCTGC CGAAAACCAT TCTCTACTGC CTGAACCCGC GCGATAACGA AGTGCTGGGC ACCATGATCG GTAACTTCCA GGGCGAAGGT ATGCCGGGCA AAATGCAGTT CGGTTCCGGC TGGTGGTTTA ACGACCAGAA AGACGGTATG GAACGTCAGA TGACCCAACT GGCGCAGCTC GGTCTGCTGA GCCGCTTTGT CGGTATGCTG ACTGACAGCC GTAGCTTCCT GTCATACACC CGTCACGAAT ACTTCCGCCG CATTCTGTGC CAGATGATCG GTCGCTGGGT GGAAGCAGGC GAAGCACCGG CGGACATCAA CCTGCTGGGC GAGATGGTGA AAAATATTTG CTTTAACAAT GCGCGTGACT ACTTCGCCAT TGAACTGAAC TAA
|
Protein sequence | MTPFMTEDFL LDTEFARRLY HDYAKDQPIF DYHCHLPPQQ IAEDYRFKNL YDIWLKGDHY KWRAMRTNGV AERLCTGDAS DREKFDAWAA TVPHTIGNPL YHWTHLELRR PFGITGKLLS PSTADEIWNE CNELLAQDNF SARGIMQQMN VKMVGTTDDP IDSLEHHAEI AKDGSFTIKV LPSWRPDKAF NIEQATFNDY MAKLGEVSDT DIRRFADLQT ALTKRLDHFA AHGCKVSDHA LDVVMFAEAN EAELDSILAR RLAGETLSEH EVAQFKTAVL VFLGAEYARR GWVQQYHIGA LRNNNLRQFK LLGPDVGFDS INDRPMAEEL SKLLSKQNEE NLLPKTILYC LNPRDNEVLG TMIGNFQGEG MPGKMQFGSG WWFNDQKDGM ERQMTQLAQL GLLSRFVGML TDSRSFLSYT RHEYFRRILC QMIGRWVEAG EAPADINLLG EMVKNICFNN ARDYFAIELN
|
| |