Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3358 |
Symbol | rpsU |
ID | 6146405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3436299 |
End bp | 3436514 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641618187 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_001745337 |
Protein GI | 170680203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000749532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTAA TTAAAGTACG TGAAAACGAG CCGTTCGACG TAGCTCTGCG TCGCTTCAAG CGTTCCTGCG AAAAAGCAGG TGTTCTGGCG GAAGTTCGTC GTCGTGAGTT CTATGAAAAA CCGACTACCG AACGTAAGCG CGCTAAAGCT TCTGCAGTGA AACGTCACGC GAAGAAACTG GCTCGCGAAA ACGCACGCCG CACTCGTCTG TACTAA
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Protein sequence | MPVIKVRENE PFDVALRRFK RSCEKAGVLA EVRRREFYEK PTTERKRAKA SAVKRHAKKL ARENARRTRL Y
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