| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3356 |
|---|
| Symbol | |
|---|
| ID | 6142707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3433542 |
|---|
| End bp | 3435005 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618185 |
|---|
| Product | anion transporter |
|---|
| Protein accession | YP_001745335 |
|---|
| Protein GI | 170681701 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000525621 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTT CCACTGAATG GTGGCGATAC CTTGCGCCGC TGGCGGTCAT CGCCATTATT
GCTCTAATTC CGGTTCCCGC AGGGCTGGAG AGTCATACCT GGCTCTACTT TGCTGTTTTT
ACTGGCGTGA TCGTTGGACT GATCCTCGAA CCCGTGCCGG GTGCCGTGGT GGCGATGGTG
GGTATCTCCA TTATCGCCAT TCTCTCTCCC TGGCTGCTGT TCAGCCCGGA GCAGCTCGCC
CAGCCAGGTT TTAAGTTCAC CGCCAAATCC CTCTCCTGGG CGGTTTCTGG TTTTTCTAAT
TCGGTTATCT GGCTGATTTT CGCCGCCTTT ATGTTTGGCA CAGGCTATGA AAAAACCGGG
CTGGGGCGAC GTATCGCGCT GATTCTGGTG AAAAAGATGG GGCATCGCAC GCTGTTTCTC
GGCTATGCGG TGATGTTCTC CGAGCTTATC CTGGCACCTG TAACACCGTC CAACTCGGCG
CGTGGTGCGG GGATTATCTA TCCCATCATC CGTAACCTGC CACCGCTCTA TCAATCACAA
CCAAACGACA GCAGTTCGCG CAGCATTGGC TCGTACATCA TGTGGATGGG GATTGTTGCC
GACTGCGTGA CCAGCGCCAT TTTCCTGACG GCGATGGCAC CTAACTTGCT GTTAATTGGC
CTGATGAAAA GCGCATCTCA CGCCACACTG AGTTGGGGCG ACTGGTTCCT CGGGATGTTG
CCGCTCAGTA TTTTACTGGT TCTGCTGGTT CCCTGGCTGG CTTACGTGCT GTACCCGCCG
GTACTGAAGT CTGGTGATCA GGTGCCGCGC TGGGCAGAGA CGGAACTGCA GGCAATGGGC
CCGCTCTGTT CGCGTGAAAA ACGGATGCTG GGGCTGATGG TAGGCGCGCT GGTGCTGTGG
ATTTTCGGCG GTGATTATAT CGATGCCGCG ATGGTCGGTT ACAGCGTGGT GGCGCTGATG
CTGCTTCTGC GCATTATCAG TTGGGACGAC ATTGTCAGTA ATAAAGCCGC GTGGAACGTT
TTCTTCTGGC TGGCCTCGCT TATCACCCTC GCTACCGGAC TCAACAACAC CGGTTTTATT
AGCTGGTTTG GCAAACTGTT AGCAGGCAGC TTAAGCGGTT ATTCGCCAAC GATAGTGATG
GTGGCGTTGA TTGTGGTGTT TTATCTACTG CGCTACTTTT TCGCCAGCGC CACGGCGTAT
ACCTCCGCTC TCGCGCCGAT GATGATTGCC GCCGCGCTGG CGATGCCGGA AATCCCGCTG
CCGGTATTCT GCCTGATGGT TGGCGCGGCA ATTGGTCTGG GGAGCATTCT TACGCCATAC
GCCACCGGAC CCAGCCCGAT TTACTACGGT AGTGGTTATC TGCCAACGGT GGATTACTGG
CGACTGGGGG CAATTTTTGG GCTGATATTC CTCGTATTGC TGGTGATTAC CGGCTTACTG
TGGATGCCCG TGGTGTTGCT TTAA
|
|---|
| Protein sequence | MKPSTEWWRY LAPLAVIAII ALIPVPAGLE SHTWLYFAVF TGVIVGLILE PVPGAVVAMV
GISIIAILSP WLLFSPEQLA QPGFKFTAKS LSWAVSGFSN SVIWLIFAAF MFGTGYEKTG
LGRRIALILV KKMGHRTLFL GYAVMFSELI LAPVTPSNSA RGAGIIYPII RNLPPLYQSQ
PNDSSSRSIG SYIMWMGIVA DCVTSAIFLT AMAPNLLLIG LMKSASHATL SWGDWFLGML
PLSILLVLLV PWLAYVLYPP VLKSGDQVPR WAETELQAMG PLCSREKRML GLMVGALVLW
IFGGDYIDAA MVGYSVVALM LLLRIISWDD IVSNKAAWNV FFWLASLITL ATGLNNTGFI
SWFGKLLAGS LSGYSPTIVM VALIVVFYLL RYFFASATAY TSALAPMMIA AALAMPEIPL
PVFCLMVGAA IGLGSILTPY ATGPSPIYYG SGYLPTVDYW RLGAIFGLIF LVLLVITGLL
WMPVVLL
|
|---|
| |