| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3354 |
|---|
| Symbol | ddtA |
|---|
| ID | 6146886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3431981 |
|---|
| End bp | 3432892 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618183 |
|---|
| Product | tartrate dehydratase subunit alpha |
|---|
| Protein accession | YP_001745333 |
|---|
| Protein GI | 170683099 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.374954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCG AAAGTAATAA GCAACAGGCA GTGAATAAGT TGACGGAGAT TGTCGCTAAC
TTTACCGCCA TGATTTCTAC CCGAATGCCC GATGACGTGG TGGACAAACT AAAACAGCTA
AAGGATGCCG AAACATCGTC GATGGGGAAA ATCATCTACC ACACGATGTT CGATAACATG
CAAAAAGCGA TCGACCTGAA TCGTCCTGCC TGTCAGGACA CCGGCGAAAT CATGTTTTTT
GTTAAGGTCG GTTCCCGTTT CCCACTGCTT GGCGAGCTGC AAAGCATACT CAAACAAGCC
GTGGAAGAGG CAACCGTCAA AGCGCCACTG CGTCACAATG CGGTAGAAAT TTTTGACGAA
GTAAACACCG GCAAAAATAC CGGCAGCGGT GTACCGTGGG TCACCTGGGA CATCATCCCC
GACAATGACG ATGCGGAAAT CGAAGTTTAC ATGGCAGGCG GCGGCTGCAC GCTACCAGGC
CGCTCGAAAG TGTTAATGCC GTCAGAAGGC TACGAAGGCG TAGTGAAATT CGTCTTCGAA
AATATCTCCA CCCTCGCCGT AAACGCCTGT CCGCCGGTAC TTGTGGGCGT TGGCATCGCT
ACCTCGGTGG AAACCGCCGC CGTGCTCTCG CGTAAAGCCA TTTTGCGCCC GATTGGCAGC
CGCCACCCCA ATCCGAAAGC GGCAGAGCTG GAGCTACGCC TGGAAGAAGG ACTCAACCGT
CTGGGGATTG GTCCACAAGG GCTGACTGGC AACAGTTCAG TGATGGGCGT ACATATCGAA
TCTGCCGCCC GCCATCCGTC AACCATCGGC GTTGCTGTTT CTACAGGCTG CTGGGCGCAT
CGTCGCGGCA CACTGCTGGT TCATGCCGAT CTCACCTTTG AAAATCTGTC TCACACCCGG
AGCGCGTTAT GA
|
|---|
| Protein sequence | MMSESNKQQA VNKLTEIVAN FTAMISTRMP DDVVDKLKQL KDAETSSMGK IIYHTMFDNM
QKAIDLNRPA CQDTGEIMFF VKVGSRFPLL GELQSILKQA VEEATVKAPL RHNAVEIFDE
VNTGKNTGSG VPWVTWDIIP DNDDAEIEVY MAGGGCTLPG RSKVLMPSEG YEGVVKFVFE
NISTLAVNAC PPVLVGVGIA TSVETAAVLS RKAILRPIGS RHPNPKAAEL ELRLEEGLNR
LGIGPQGLTG NSSVMGVHIE SAARHPSTIG VAVSTGCWAH RRGTLLVHAD LTFENLSHTR
SAL
|
|---|
| |