Gene EcSMS35_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3342 
Symbol 
ID6142898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3417826 
End bp3418455 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content42% 
IMG OID641618171 
Productputative inner membrane protein 
Protein accessionYP_001745321 
Protein GI170682259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.781071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAT TCGCCGACTA TAACACCCCT TATCTTTTCG CTATTTCCTT TGTACTGTTG 
ATCGGCCTTT TAGAAATTTT TGCGCTTATC TGCGGTCACA TGCTCTCCGG TGCACTTGAT
GCACATCTTG ACCATTATGA TTCCATAACC ACAGGTCATA TTAGCCAGGC ACTTCATTAT
CTCAATATCG GAAGATTGCC AGCTCTCGTC GTTCTTTGCT TACTGGCTGG TTTTTTTGGT
CTTATTGGCA TCCTGTTGCA GCATACCTGC ATCATGGTCT GGCAATCACC ACTCTCGAAC
CTGTTTGTGG TTCCTGTCAG TTTACTGTTT ACGATTATTG CGGTGCATTA TACCGGTAAA
ATAGTTGCGC CCTGGATTCC ACGCGATCAT AGCTCAGCTA TTACAGAAGA AGAATATATT
GGTAGCATGG CGTTAATTAC CGGTCATCAA GCCACTTCAG GTAATCCCTG CGAAGGAAAA
CTCACCGATC AATTTGGCCA AATACATTAT TTACTACTGG AGCCTGAAGA AGGAAAAATT
TTCACTAAAG GAGACAAAGT GTTAATTATT TGCCGACTTT CTGCAACTCG ATATTTGGCG
GAAAACAATC CCTGGCCCCA AATATTGTAA
 
Protein sequence
MILFADYNTP YLFAISFVLL IGLLEIFALI CGHMLSGALD AHLDHYDSIT TGHISQALHY 
LNIGRLPALV VLCLLAGFFG LIGILLQHTC IMVWQSPLSN LFVVPVSLLF TIIAVHYTGK
IVAPWIPRDH SSAITEEEYI GSMALITGHQ ATSGNPCEGK LTDQFGQIHY LLLEPEEGKI
FTKGDKVLII CRLSATRYLA ENNPWPQIL