Gene EcSMS35_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3335 
Symbol 
ID6145881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3413100 
End bp3413756 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID641618164 
Productputative disulfide oxidoreductase 
Protein accessionYP_001745314 
Protein GI170681279 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAG ATCTTCGCAC ATCACCAGTT GACACACTGG TCAGATGGCA GGAGCAACGC 
TTGTTGTGGT TGTTAATGGC CGTTGCGATG GGCGCGTTAA TTATCCTGGC GCACTCTTTC
TTCCAGATCT ATCTCTACAT GGCACCCTGT GAGCAATGTG TATACATTCG CTACGCCATG
TTTGTGATGG TTATTGGAGG ATTGGTTGCA GCGATCAACC CAAAGAACAT CATCCTAAAG
CTAATTGGCT GCGTGATGGC ATTTTACGGC AGCATTTTGG GACTGAAGTT TTCGCTCAAA
CTGAACGATA TCCACCATGC AGTACATAAT CCGGATCCCG ATTCACTGTT TGGCGTACAG
GGTTGCTCTA CCGATCCAAC TTTTCCCTTT AACCTGCCGC TGGCACAGTG GGCACCAAAT
TGGTTCAAGC CTACCGGGGA TTGTGGCTAT GACGCACCAA TCGTTCCTGA TGGCGTCACA
CTGAGCAGCA CGCAACAGTG GTTTGTGGAA ATGTATCAGC AATCTGAAGG CTGGTATCTG
CTACCACCAT GGCATTTTAT GAATATGGCT CAGGCTTGTA TGCTGGCTTT TGGTATGTGT
CTGGTGCTGC TGGTCATTAT GAGTGGCGCA TGGGCACTTA AAATCATCAG AGGCTAA
 
Protein sequence
MWKDLRTSPV DTLVRWQEQR LLWLLMAVAM GALIILAHSF FQIYLYMAPC EQCVYIRYAM 
FVMVIGGLVA AINPKNIILK LIGCVMAFYG SILGLKFSLK LNDIHHAVHN PDPDSLFGVQ
GCSTDPTFPF NLPLAQWAPN WFKPTGDCGY DAPIVPDGVT LSSTQQWFVE MYQQSEGWYL
LPPWHFMNMA QACMLAFGMC LVLLVIMSGA WALKIIRG