| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3325 |
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| Symbol | parE |
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| ID | 6146043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3402026 |
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| End bp | 3403918 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618154 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001745304 |
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| Protein GI | 170679703 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.707036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CTTATAACGC TGATGCCATT GAGGTACTCA CCGGGCTTGA GCCGGTTCGC
CGCCGTCCGG GGATGTATAC CGATACCACT CGCCCTAACC ATTTGGGGCA AGAAGTTATT
GATAACAGTG TCGATGAAGC ACTGGCGGGC CACGCAAAAC GCGTGGATGT AATCTTACAT
GCCGACCAGT CGTTAGAAGT GATTGACGAT GGGCGCGGGA TGCCGGTAGA TATTCACCCG
GAAGAGGGGG TACCGGCGGT TGAACTGATT CTTTGCCGTC TGCACGCGGG CGGTAAATTC
TCTAACAAAA ATTACCAGTT CTCTGGCGGC CTGCATGGCG TGGGGATTTC GGTGGTTAAC
GCCCTGTCGA AGCGCGTAGA AGTTAACGTA CGCCGCGATG GTCAGATCTA TAACATCGCC
TTTGAAAATG GCGAAAAGGT GCAAGATTTA CAGGTTATCG GCACTTGCGG TAAACGCAAT
ACCGGTACCA GCGTGCACTT CTGGCCGGAT GAAACCTTCT TTGACAGCCC GCGTTTTTCT
GTTTCACGCC TGACGCATGT GCTGAAAGCC AAAGCGGTAC TGTGCCCTGG TGTTGAGATC
ACCTTTAAAG ATGAGATCAA CAACACCGAA CAGCGCTGGT GCTATCAGGA CGGTCTGAAT
GATTACCTGG CGGAAGCGGT AAACGGTTTA CCGACGCTGC CAGAAAAACC GTTTATCGGT
AATTTCGCTG GCGATACTGA AGCGGTGGAC TGGGCGCTAC TGTGGCTGCC GGAAGGCGGT
GAACTGCTGA CCGAAAGCTA CGTCAACCTG ATCCCAACGA TGCAGGGTGG TACGCACGTT
AATGGCTTGC GTCAGGGCCT GCTGGATGCG ATGCGCGAGT TCTGTGAATA TCGCAACATT
CTGCCGCGCG GCGTGAAGCT GTCGGCGGAA GATATCTGGG ATCGCTGCGC CTATGTGCTG
TCAGTAAAAA TGCAGGATCC ACAGTTTGCC GGGCAGACCA AAGAGCGTCT CTCTTCGCGT
CAGTGCGCGG CATTTGTTTC TGGCGTGGTG AAAGATGCCT TCACCTTGTG GCTGAACCAG
AACGTTCAGG CGGCTGAACT GCTGGCGGAG ATGGCGATTT CCAGCGCCCA GCGCCGTATG
CGTGCGGCCA AAAAAGTGGT GCGTAAAAAG CTGACCAGCG GCCCGGCGTT GCCTGGCAAA
CTGGCTGACT GTACCGCGCA GGACCTTAAC CGTACCGAGC TGTTCCTTGT GGAAGGTGAC
TCCGCAGGCG GATCTGCCAA GCAGGCGCGC GATCGCGAAT ATCAGGCGAT CATGCCACTG
AAAGGTAAGA TCCTTAACAC CTGGGAAGTC TCTTCCGACG AAGTGCTGGC TTCGCAGGAA
GTGCACGATA TTTCGGTAGC TATCGGTATC GATCCTGACA GCGACGATTT GAGCCAGCTT
CGTTACGGCA AGATCTGTAT CCTGGCGGAT GCTGACTCCG ATGGTCTGCA CATTGCCACG
CTGCTCTGCG CTTTGTTTGT AAAACACTTC CGCGCATTGG TGAAACACGG TCACGTTTAC
GTTGCACTGC CACCGCTCTA CCGTATTGAC CTCGGGAAAG AGGTTTATTA CGCGCTGACG
GAAGAAGAGA AAGAGGGCGT ACTTGAGCAA TTAAAACGCA AGAAAGGCAA GCCAAACGTC
CAGCGTTTTA AAGGTCTCGG GGAAATGAAC CCGATGCAAT TGCGCGAAAC CACGCTTGAT
CCGAACACTC GCCGTCTGGT GCAGTTGACT ATCGATGATG AAGACGATCA GCGTACTGAC
GCGATGATGG ATATGCTGCT GGCGAAGAAA CGCTCGGAAG ATCGCCGCAA CTGGTTGCAA
GAGAAAGGCG ACATGGCAGA GATTGAGGTC TGA
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| Protein sequence | MTQTYNADAI EVLTGLEPVR RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HAKRVDVILH
ADQSLEVIDD GRGMPVDIHP EEGVPAVELI LCRLHAGGKF SNKNYQFSGG LHGVGISVVN
ALSKRVEVNV RRDGQIYNIA FENGEKVQDL QVIGTCGKRN TGTSVHFWPD ETFFDSPRFS
VSRLTHVLKA KAVLCPGVEI TFKDEINNTE QRWCYQDGLN DYLAEAVNGL PTLPEKPFIG
NFAGDTEAVD WALLWLPEGG ELLTESYVNL IPTMQGGTHV NGLRQGLLDA MREFCEYRNI
LPRGVKLSAE DIWDRCAYVL SVKMQDPQFA GQTKERLSSR QCAAFVSGVV KDAFTLWLNQ
NVQAAELLAE MAISSAQRRM RAAKKVVRKK LTSGPALPGK LADCTAQDLN RTELFLVEGD
SAGGSAKQAR DREYQAIMPL KGKILNTWEV SSDEVLASQE VHDISVAIGI DPDSDDLSQL
RYGKICILAD ADSDGLHIAT LLCALFVKHF RALVKHGHVY VALPPLYRID LGKEVYYALT
EEEKEGVLEQ LKRKKGKPNV QRFKGLGEMN PMQLRETTLD PNTRRLVQLT IDDEDDQRTD
AMMDMLLAKK RSEDRRNWLQ EKGDMAEIEV
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