| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3318 |
|---|
| Symbol | fitR |
|---|
| ID | 6145974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3394770 |
|---|
| End bp | 3395657 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641618147 |
|---|
| Product | iron transport system regulatory protein FitR |
|---|
| Protein accession | YP_001745297 |
|---|
| Protein GI | 170681276 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0873687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGA AAGATAAAGC GCGGGTTGAT ATTTTTGGTG AGCGTTTTCG CACTCGCGCG
AGTCAGTTAA CGCCTGGGTT AAGAGTTGTC GCCAGCTACA TTAATGAGCA TCGTGAAGTG
GTACTCGAGC AAACGGCGAT GGAAATTGCG GCCACGTTGA ACACTTCCGA TGCCACAGTT
ATCAGGGCTA TACAGGCCCT GGGGTTTGCC GGGCTGCGTG ATCTGAAACG CACTCTGGAA
CAGTGGCTTG GTCCAGCCCT TAGTTCCAGC GAAAAGATGT CTACGACGGT GAGTAACTTG
ACGAGCGATG TTAACACCGC AATCGACTTT GTTCTTGAAG GGCATTTGTA TACCTGTAAT
GTCCTGTCAG AGCCTGAAAA CCGCCACGCG CTTGCGCAAG CTGTAGCGTT GTTGGTGCAG
GCACGGCAAG TCGCTATTTT TGGCATTGGC GCTTCGGGTA TCCTGGCGGA CTATACCGCA
CGACTATTCA ACCGCATAGG TTTGCCTGCC ACGGCACTAA ACCGTACGGG TATTGGCCTT
GCCGAGCAAC TGATCGCGCT TCAACGTGGC GATGTTCTGA TCATGATGGC GCAAAAATCT
GCGCACCGGG AAGGGCTGAC AACGCTTCGT GAGGCGAGGC GGCTGGGGAT CCCTGTTATT
TTGCTGACAA ACGCGCTGGA TTCACGTTTT AGCAAAGACG CCAGTATCGT GATTCATGTT
CCGCGCGGGG ATGAAAAAGG GAAAACGCCG CTACATGGTA CGGTATTGTT GTGTCTGGAA
ATGATTGTCT GGTCGGTAGC TTCCGCAGTG CCGCAGCGTG CGGTTAAAAC CATTAAGCGA
ATTAACGATT TCCATCGAGG ACTGAAAACG GGAAGAAAGA ATGGCTAA
|
|---|
| Protein sequence | MIQKDKARVD IFGERFRTRA SQLTPGLRVV ASYINEHREV VLEQTAMEIA ATLNTSDATV
IRAIQALGFA GLRDLKRTLE QWLGPALSSS EKMSTTVSNL TSDVNTAIDF VLEGHLYTCN
VLSEPENRHA LAQAVALLVQ ARQVAIFGIG ASGILADYTA RLFNRIGLPA TALNRTGIGL
AEQLIALQRG DVLIMMAQKS AHREGLTTLR EARRLGIPVI LLTNALDSRF SKDASIVIHV
PRGDEKGKTP LHGTVLLCLE MIVWSVASAV PQRAVKTIKR INDFHRGLKT GRKNG
|
|---|
| |