| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3314 |
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| Symbol | qseB |
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| ID | 6146322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3391684 |
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| End bp | 3392343 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618143 |
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| Product | DNA-binding transcriptional regulator QseB |
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| Protein accession | YP_001745293 |
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| Protein GI | 170683979 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.11461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATTT TACTGATAGA AGATGACATG CTGATTGGCG ACGGCATCAA AACGGGCCTT
AGTAAAATGG GTTTTAGCGT CGACTGGTTT ACACAAGGTC GTCAGGGAAA AGAGGCGCTA
TATAGCGCAC CTTATGATGC GGTGATCCTG GATTTAACCT TACCGGGCAT GGATGGTCGC
GATATTTTGC GCGAATGGCG AGAAAAAGGT CAGCGTGAGC CGGTTTTGAT CCTGACCGCG
CGCGATGCGC TGGCGGAACG TGTAGAAGGG CTGCGTCTGG GAGCTGACGA TTATCTGTGT
AAACCTTTTG CGTTGATAGA AGTCGCCGCC AGGCTGGAAG CTCTGATGCG CCGAACCAAC
GGCCAGGCCA GCAACGAGCT GCGCCACGGC AACGTCATGC TCGACCCCGG CAAACGTATC
GCCACGCTGG CTGGCGAACC CTTAACGCTG AAGCCAAAAG AATTTGCCCT GCTGGAATTA
CTGATGCGTA ACGCTGGTCG GGTACTGCCG CGCAAACTGA TTGAAGAGAA ACTGTATACC
TGGGACGAAG AGGTCACCAG TAATGCCGTT GAAGTGCATG TGCATCATCT GCGACGCAAA
CTCGGCAGTG ATTTTATTCG TACCGTTCAT GGTATTGGCT ACACATTAGG TGAGAAATGA
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| Protein sequence | MRILLIEDDM LIGDGIKTGL SKMGFSVDWF TQGRQGKEAL YSAPYDAVIL DLTLPGMDGR
DILREWREKG QREPVLILTA RDALAERVEG LRLGADDYLC KPFALIEVAA RLEALMRRTN
GQASNELRHG NVMLDPGKRI ATLAGEPLTL KPKEFALLEL LMRNAGRVLP RKLIEEKLYT
WDEEVTSNAV EVHVHHLRRK LGSDFIRTVH GIGYTLGEK
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