Gene EcSMS35_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3313 
Symbol 
ID6144144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3391140 
End bp3391532 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID641618142 
Producthypothetical protein 
Protein accessionYP_001745292 
Protein GI170682123 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0775497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACGCAGCAGT AATCGCAGTA ATGGCCCTGT GCAGTGCACC GGTTATGGCA 
GCAGAGCAGG GAGGTTTTTC TGGCCCATCG GCAACGCAAA GTCAGGCCGG AGGATTCCAG
GGGCCGAATG GCAGCGTAAC GACTATAGAA AGCGCAAAAT CCCTGCGTGA CGACACCTGG
GTAACCCTGC GCGGCAATAT CGTTGAACGC ATCTCTGACG ATCTCTACGT GTTCAAAGAT
GCCAGCGGTA CTATCAATGT TGATATCGAC CACAAACGCT GGAACGGCAT GACGGTGACG
CCGAAAGATA CGGTTGAGAT TCAGGGTGAA GTCGATAAAG ACTGGAATTC TGTTGAAATT
GACGTCAAAC AGATCCGCAA AGTAAATCCG TAA
 
Protein sequence
MKKYAAVIAV MALCSAPVMA AEQGGFSGPS ATQSQAGGFQ GPNGSVTTIE SAKSLRDDTW 
VTLRGNIVER ISDDLYVFKD ASGTINVDID HKRWNGMTVT PKDTVEIQGE VDKDWNSVEI
DVKQIRKVNP