Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3310 |
Symbol | parC |
ID | 6145863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3386493 |
End bp | 3388751 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618139 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_001745289 |
Protein GI | 170681468 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.31337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0249309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA TGGCAGAGCG CCTTGCGCTA CATGAATTTA CGGAAAACGC CTACTTAAAC TACTCCATGT ACGTGATCAT GGACCGTGCG TTGCCGTTTA TTGGTGATGG TCTGAAACCC GTTCAGCGGC GCATTGTGTA TGCGATGTCT GAACTGGGTC TGAATGCCAG TGCCAAATTT AAAAAATCGG CCCGTACCGT CGGTGACGTA CTGGGTAAAT ACCATCCGCA CGGCGATATT GCCTGTTATG GAGCGATGGT CCTGATGGCG CAGCCGTTCT CTTACCGTTA TCCGCTGGTT GATGGTCAGG GGAACTGGGG CGCGCCGGAC GATCCGAAAT CGTTCGCGGC AATGCGTTAC ACCGAATCCC GGTTATCGAA ATATTCTGAG TTGCTATTAA GCGAGCTTGG ACAGGGGACG GCTGACTGGG TGCCAAACTT CGACGGCACC TTACAGGAGC CGAAAATGCT GCCAGCCCGC CTGCCGAACA TTTTGCTTAA CGGCACCACC GGTATTGCCG TCGGCATGGC GACCGATATT CCACCGCATA ACCTGCGTGA AGTGGCTCAG GCGGCAATCG CATTAATCGA CCAGCCGAAA ACCACGCTCG ATCAGCTGCT GGATATCGTG CAGGGGCCGG ATTATCCGAC TGAAGCGGAA ATTATCACTT CGCGCGCCGA GATTCGTAAA ATCTACGAGA ACGGACGTGG TTCAGTGCGT ATGCGCGCGG TTTGGAAGAA AGAAGATGGC GCGGTGGTTA TTAGCGCATT GCCGCATCAG GTTTCAGGTG CGCGCGTACT GGAGCAAATT GCTGCGCAAA TGCGCAACAA AAAGCTGCCG ATGGTTGACG ATCTGCGCGA TGAATCTGAC CACGAGAACC CGACCCGTCT GGTGATTGTG CCGCGTTCCA ACCGCGTGGA TATGGATCAG GTGATGAACC ACCTCTTCGC TACCACCGAT CTGGAAAAGA GCTATCGCAT TAACCTCAAT ATGATCGGTC TGGATGGTCG TCCGGCGGTG AAAAACCTGC TGGAAATCCT CTCCGAATGG CTGGTGTTCC GCCGCGATAC CGTGCGCCGC CGACTGAACT ATCGTCTGGA GAAAGTCCTC AAGCGCCTGC ATATCCTCGA AGGTTTGCTG GTGGCGTTTC TCAATATCGA CGAAGTGATT GAGATCATTC GTAATGAAGA TGAACCGAAA CCGGCGCTGA TGTCGCGGTT TGGCCTTACG GAAACCCAGG CGGAAGCGAT CCTCGAACTG AAACTGCGTC ATCTTGCCAA ACTGGAAGAG ATGAAGATTC GCGGTGAGCA GAGTGAGCTG GAAAAAGAGC GCGACCAGTT GCAGGGCATT TTGGCTTCCG AGCGTAAAAT GAATAACCTG CTGAAGAAAG AACTGCAGGC AGACGCGCAA GCCTACGGTG ACGAACGTCG TTCGCCGTTG CAGGAACGCG AAGAAGCGAA AGCGATGAGC GAGCACGACA TGCTGCCGTC TGAACCTGTC ACCATTGTGC TGTCGCAGAT GGGCTGGGTA CGCAGCGCTA AAGGCCATGA TATCGACGCG CCGGGCCTGA ATTATAAAGC GGGCGATAGC TTCAAAGCGG CGGTGAAAGG TAAGAGCAAC CAACCGGTAG TGTTTGTTGA TTCCACCGGT CGTAGCTATG CCATCGACCC GATTACGCTG CCGTCGGCGC GTGGTCAGGG CGAACCGCTC ACCGGCAAAT TAACGTTGCC GCCTGGAGCG ACCGTTGACC ATATGCTGAT GGAAAGCGAC GATCAGAAAC TGCTGATGGC TTCCGATGCG GGTTACGGTT TCGTCTGCAC CTTTAACGAT CTGGTGGCGC GTAACCGTGC AGGTAAGGCT TTGATCACCT TACCGGAAAA TGCCCATGTT ATGCCGCCGG TGGTGATTGA GGATGCTTCC GATATGCTGC TGGCAATCAC TCAGGCAGGC CGTATGTTGA TGTTCCCGGT AAGCGATCTG CCGCAGTTGT CGAAGGGCAA AGGCAATAAG ATTATCAACA TTCCGTCGGC AGAAGCCGCG CGTGGCGAGG ATGGTCTGGC GCAACTGTAC GTTCTACCAC CGCAAAGCAC GCTGACCATT CATGTTGGGA AACGCAAAAT TAAACTGCGT CCGGAAGAGC TACAGAAAGT CACTGGCGAA CGTGGACGCC GCGGTACGTT GATGCGCGGT TTGCAGCGTA TCGATCGTGT TGAGATCGAC TCTCCTCGCC GTGCCAGCAG CGGTGATAGC GAAGAGTAA
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Protein sequence | MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF KKSARTVGDV LGKYHPHGDI ACYGAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY TESRLSKYSE LLLSELGQGT ADWVPNFDGT LQEPKMLPAR LPNILLNGTT GIAVGMATDI PPHNLREVAQ AAIALIDQPK TTLDQLLDIV QGPDYPTEAE IITSRAEIRK IYENGRGSVR MRAVWKKEDG AVVISALPHQ VSGARVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV PRSNRVDMDQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILSEW LVFRRDTVRR RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGLT ETQAEAILEL KLRHLAKLEE MKIRGEQSEL EKERDQLQGI LASERKMNNL LKKELQADAQ AYGDERRSPL QEREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN QPVVFVDSTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVDHMLMESD DQKLLMASDA GYGFVCTFND LVARNRAGKA LITLPENAHV MPPVVIEDAS DMLLAITQAG RMLMFPVSDL PQLSKGKGNK IINIPSAEAA RGEDGLAQLY VLPPQSTLTI HVGKRKIKLR PEELQKVTGE RGRRGTLMRG LQRIDRVEID SPRRASSGDS EE
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