Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3301 |
Symbol | |
ID | 6146013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3376491 |
End bp | 3377240 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641618131 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001745281 |
Protein GI | 170684305 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0570986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGG TTATTACAAA GCGCCGCTAT TACGATATTG GTCTACAGAT TGAAGAGCTG CTGTATTCAG GCGTATTTAA GGCCGGAGAA CGCTTACCTT CAGAACGTGA ACTGAGCGAG CGGTTTAATA CCAGCCGAAC TACCATTCGT GAAGCCATCA TTATGCTGGA ACTGAAAGGC GTATTGAATG TGAAGCAAGG GTCAGGGATT TTCTTTGTCG ACTCCACCGA TAAGCTCAAC CAGAAATCAT TAATGCCCTA TTCAGAAATT GGCCCGTTTG AACTGTTGCA GGCGCGTCAG GTGATTGAGA GCAATATTAC TGGTTTTGCA GCCAGCCAGA TTAGCTTTAA CGAGTTACAA GAGTTAAAGA AAATCATTAG ATTGCAGGAA AACGCTATCG CTGCGGAAAG TGATAAATTT GAAGACCTGG ATCACCGATT TCATAGCATT ATTGCCGAAG CGACGCAAAA TCGGGTACTC ATCAAACAAG CTGCTGAATT ATGGCGGGCA GTTCGTACAG AAAACCCCCG CTGGAAGAAA CTTAACTACA AGTACCTGCA TGAAAAGCAT TTGCGTCTGC AATGGCTGGA AGATCACCGG GCTATTTTCC TTGCGCTACA ACAGAAAGAT TCAGAGCTCG CCAGGGAAGC ATCCTGGAGA CATCTGGAAA ACAGCAAAAA TGAACTGATC AAAATCTTCA AACAAGACGC TTCCATCAGC GATTTTGATG ACTTTTTCTT CGCTCGTTAA
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Protein sequence | MEQVITKRRY YDIGLQIEEL LYSGVFKAGE RLPSERELSE RFNTSRTTIR EAIIMLELKG VLNVKQGSGI FFVDSTDKLN QKSLMPYSEI GPFELLQARQ VIESNITGFA ASQISFNELQ ELKKIIRLQE NAIAAESDKF EDLDHRFHSI IAEATQNRVL IKQAAELWRA VRTENPRWKK LNYKYLHEKH LRLQWLEDHR AIFLALQQKD SELAREASWR HLENSKNELI KIFKQDASIS DFDDFFFAR
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