Gene EcSMS35_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3301 
Symbol 
ID6146013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3376491 
End bp3377240 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content44% 
IMG OID641618131 
ProductGntR family transcriptional regulator 
Protein accessionYP_001745281 
Protein GI170684305 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0570986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG TTATTACAAA GCGCCGCTAT TACGATATTG GTCTACAGAT TGAAGAGCTG 
CTGTATTCAG GCGTATTTAA GGCCGGAGAA CGCTTACCTT CAGAACGTGA ACTGAGCGAG
CGGTTTAATA CCAGCCGAAC TACCATTCGT GAAGCCATCA TTATGCTGGA ACTGAAAGGC
GTATTGAATG TGAAGCAAGG GTCAGGGATT TTCTTTGTCG ACTCCACCGA TAAGCTCAAC
CAGAAATCAT TAATGCCCTA TTCAGAAATT GGCCCGTTTG AACTGTTGCA GGCGCGTCAG
GTGATTGAGA GCAATATTAC TGGTTTTGCA GCCAGCCAGA TTAGCTTTAA CGAGTTACAA
GAGTTAAAGA AAATCATTAG ATTGCAGGAA AACGCTATCG CTGCGGAAAG TGATAAATTT
GAAGACCTGG ATCACCGATT TCATAGCATT ATTGCCGAAG CGACGCAAAA TCGGGTACTC
ATCAAACAAG CTGCTGAATT ATGGCGGGCA GTTCGTACAG AAAACCCCCG CTGGAAGAAA
CTTAACTACA AGTACCTGCA TGAAAAGCAT TTGCGTCTGC AATGGCTGGA AGATCACCGG
GCTATTTTCC TTGCGCTACA ACAGAAAGAT TCAGAGCTCG CCAGGGAAGC ATCCTGGAGA
CATCTGGAAA ACAGCAAAAA TGAACTGATC AAAATCTTCA AACAAGACGC TTCCATCAGC
GATTTTGATG ACTTTTTCTT CGCTCGTTAA
 
Protein sequence
MEQVITKRRY YDIGLQIEEL LYSGVFKAGE RLPSERELSE RFNTSRTTIR EAIIMLELKG 
VLNVKQGSGI FFVDSTDKLN QKSLMPYSEI GPFELLQARQ VIESNITGFA ASQISFNELQ
ELKKIIRLQE NAIAAESDKF EDLDHRFHSI IAEATQNRVL IKQAAELWRA VRTENPRWKK
LNYKYLHEKH LRLQWLEDHR AIFLALQQKD SELAREASWR HLENSKNELI KIFKQDASIS
DFDDFFFAR