Gene EcSMS35_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3293 
Symbol 
ID6144865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3368657 
End bp3369316 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID641618123 
Producthypothetical protein 
Protein accessionYP_001745273 
Protein GI170683149 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.787334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA TTCAAGATAT CATCGCTGCG CTCTGGCAAC ACGACTTTGC CGCGCTGGCG 
GATCCTCATA TTGTTAGCGT TGTTTACTTT GTCATGTTTG CCACGCTGTT TTTAGAAAAC
GGCCTGCTGC CCGCCTCATT TTTGCCAGGC GACAGCTTGT TGATATTGGC TGGCGCATTG
ATTGCCCAGG GGGTTATGGA TTTTCTGCCT ACGATTGCGA TTCTGACCGC CGCAGCAAGT
CTGGGCTGCT GGCTAAGTTA TATTCAGGGG CGCTGGTTAG GAAATACCAA AACGGTGAAA
GGCTGGCTGG CACAGCTTCC TGCTAAATAT CACCAGCGCG CCACCTGCAT GTTTGACCGC
CACGGTCTGC TGGCGCTGCT GGCTGGACGT TTTCTTGCAT TTGTCCGTAC GCTGCTGCCA
ACCATGGCAG GTATTTCCGG TTTGCCAAAC CGCCGTTTCC AGTTTTTCAA CTGGTTAAGC
GGATTGCTGT GGGTCAGCGT GGTAACCAGT TTCGGCTATG CATTAAGTAT GATTCCGTTT
GTTAAACGCC ATGAAGATCA GGTAATGACG TTCCTGATGA TCCTGCCAAT TGCCTTGTTA
ACCGCTGGCT TGTTGGGCAC GCTGTTTGTG GTGATTAAAA AAAAATACTG TAACGCCTGA
 
Protein sequence
MAVIQDIIAA LWQHDFAALA DPHIVSVVYF VMFATLFLEN GLLPASFLPG DSLLILAGAL 
IAQGVMDFLP TIAILTAAAS LGCWLSYIQG RWLGNTKTVK GWLAQLPAKY HQRATCMFDR
HGLLALLAGR FLAFVRTLLP TMAGISGLPN RRFQFFNWLS GLLWVSVVTS FGYALSMIPF
VKRHEDQVMT FLMILPIALL TAGLLGTLFV VIKKKYCNA