| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3292 |
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| Symbol | metC |
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| ID | 6144171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3367330 |
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| End bp | 3368517 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618122 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001745272 |
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| Protein GI | 170680690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AAAAGCTTGA TACTCAACTG GTGAATGCAG GACGCAGCAA AAAATACACT
CTCGGCGCGG TAAATAGCGT GATTCAGCGC GCTTCTTCGC TGGTCTTTGA CAGTGTGGAA
GCCAAAAAGC ACGCGACACG CAATCGCGCC AATGGCGAGT TGTTCTATGG GCGGCGCGGA
ACGTTAACCC ATTTTTCCTT ACAACAAGCG ATGTGTGAAC TGGAAGGTGG CGCAGGCTGC
GCGCTATTTC CCTGCGGGGC GGCGGCGGTT GCTAATTCGA TTCTTGCTTT TGTCGAACAG
GGCGATCATG TGTTGATGAC CAACACCGCC TATGAACCGA GTCAGGATTT CTGTAGCAAA
ATCCTCAGCA AACTGGGCGT AACGACATCG TGGTTTGATC CACTGATTGG TGCCGATATC
GTTAAGCATC TGCAGCCAAA CACTAAAATC GTGTTTCTGG AATCGCCAGG CTCCATCACC
ATGGAAGTCC ACGACGTTCC GGCGATTGTT GCCGCCGTAC GCAGTGTGGT GCCGGATGCC
ATCATTATGA TCGACAACAC CTGGGCAGCC GGTGTGCTGT TTAAGGCGCT GGATTTTGGC
ATTGATGTTT CCATTCAGGC CGCTACCAAA TATCTGGTTG GGCATTCAGA TGCGATGATT
GGCACTGCGG TGTGCAATGC CCGTTGCTGG GAGCAGCTGC GAGAGAATGC CTATCTGATG
GGCCAGATGG TCGATGCCGA TACCGCCTAT ATAACCAGCC GTGGCCTGCG CACTTTGGGT
GTTCGCCTGC GTCAACATCA TGAAAGCAGT CTGAAAGTGG CTGAATGGCT GGCAGAACAT
CCCCAAGTAG CGCGAGTTAA CCACCCTGCT CTGCCTGGCA GTAAAGGCCA CGAATTCTGG
AAACGAGACT TTACAGGTAG CAGCGGGCTA TTTTCCTTTG TGCTTAAGAA AAAGCTCAAT
GATGAAGAAC TGGCGAACTA TCTGGATAAC TTCAGTTTAT TCAGCATGGC CTACTCGTGG
GGCGGGTATG AATCGTTGAT CCTGGCAAAT CAACCAGAAC ATATCGCCGC CATTCGCCCA
CAAGGCGAGA TCGATTTTAG CGGGACCTTG ATTCGCCTGC ATATTGGTCT GGAAGATGTC
GACGATCTGA TTGCCGATCT GGATGCCGGT TTTGCGCGAA TTGTATAA
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| Protein sequence | MADKKLDTQL VNAGRSKKYT LGAVNSVIQR ASSLVFDSVE AKKHATRNRA NGELFYGRRG
TLTHFSLQQA MCELEGGAGC ALFPCGAAAV ANSILAFVEQ GDHVLMTNTA YEPSQDFCSK
ILSKLGVTTS WFDPLIGADI VKHLQPNTKI VFLESPGSIT MEVHDVPAIV AAVRSVVPDA
IIMIDNTWAA GVLFKALDFG IDVSIQAATK YLVGHSDAMI GTAVCNARCW EQLRENAYLM
GQMVDADTAY ITSRGLRTLG VRLRQHHESS LKVAEWLAEH PQVARVNHPA LPGSKGHEFW
KRDFTGSSGL FSFVLKKKLN DEELANYLDN FSLFSMAYSW GGYESLILAN QPEHIAAIRP
QGEIDFSGTL IRLHIGLEDV DDLIADLDAG FARIV
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